Gene description
GO biological process
cellular response to blue light, positive regulation of transcription, DNA-templated, DNA-templated transcription, initiation, response to red light, response to blue light, response to far red light, photosystem II assembly, regulation of transcription, chloroplast organization, embryo sac development, regulation of RNA biosynthetic process, cellular response to salt stress
GO cellular component
mitochondrion, chloroplast
GO molecular function
plastid sigma factor activity, DNA-directed 5'-3' RNA polymerase activity, DNA binding, transcription factor activity, sequence-specific DNA binding, protein binding, sigma factor activity
Protein domain
Pfam | PF04539, Sigma-70 region 3 |
Pfam | PF04542, Sigma-70 region 2 |
Pfam | PF04545, Sigma-70, region 4 |
Metabolic pathway
Not involved in metabolic pathway
KEGG pathway
Not involved in KEGG pathway
Coexpression network
Differentially expressed condition
18 conditions
Series | Control | Treatment | Log2FC | Adj. P value |
---|---|---|---|---|
GSE17464 | Laer, control | Laer, Alternaria brassicicola 3 d | -2.29 | 9.14E-03 |
GSE17464 | Laer, control | Laer, PstDC3000 12 h | -2.77 | 1.52E-03 |
GSE17464 | Penta, control | Penta, Alternaria brassicicola 3 d | -2.99 | 4.74E-04 |
GSE17464 | Penta, control | Penta, PstDC3000 12 h | -3.61 | 2.46E-05 |
GSE17464 | Penta, control | Penta, Flg22 2 h | -1.94 | 2.07E-02 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 18 h | -3.17 | 1.25E-13 |
GSE26679 | Col, WT, GC 0 h | Col, WT, GC 36 h | -4.94 | 7.69E-18 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 18 h | -3.09 | 1.66E-13 |
GSE26679 | Col, edr1, GC 0 h | Col, edr1, GC 36 h | -4.87 | 1.01E-17 |
GSE37269 | St0, WT, control | St0, WT, TEV 21 d | -1.94 | 1.51E-03 |
GSE45212 | Col, WT, PstDC3000 AvrRpt2 0 h | Col, WT, PstDC3000 AvrRpt2 12 h | -2.30 | 1.00E-10 |
GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | -2.20 | 2.21E-10 |
GSE52979 | Col, WT, acetone | Col, WT, acetone flg22_2 h | -2.30 | 1.83E-03 |
GSE52979 | Col, WT, oxo_C14_HSL | Col, WT, oxo_C14_HSL flg22_2 h | -2.62 | 5.37E-04 |
GSE5520 | Col, WT, control 10 h | Col, WT, Cor- 10 h | -2.03 | 1.59E-03 |
GSE5520 | Col, WT, control 10 h | Col, WT, Cor- hrpS- 10 h | -2.11 | 1.11E-02 |
GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | -2.57 | 9.78E-04 |
GSE9674 | Ws-4, WT, control | Ws-4, WT, Xanthomonas strain Xcc147 90-105 min | 2.53 | 3.47E-02 |
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