Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G24120

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:0015843: methylammonium transport0.00E+00
3GO:0046677: response to antibiotic0.00E+00
4GO:0007623: circadian rhythm9.76E-09
5GO:0042754: negative regulation of circadian rhythm1.11E-07
6GO:0071483: cellular response to blue light2.02E-06
7GO:0048574: long-day photoperiodism, flowering1.85E-05
8GO:0010100: negative regulation of photomorphogenesis1.85E-05
9GO:0046467: membrane lipid biosynthetic process4.18E-05
10GO:0006551: leucine metabolic process4.18E-05
11GO:0042548: regulation of photosynthesis, light reaction1.04E-04
12GO:0006898: receptor-mediated endocytosis1.04E-04
13GO:0043496: regulation of protein homodimerization activity1.04E-04
14GO:0050992: dimethylallyl diphosphate biosynthetic process1.04E-04
15GO:0016122: xanthophyll metabolic process1.04E-04
16GO:0009915: phloem sucrose loading1.04E-04
17GO:0009624: response to nematode1.13E-04
18GO:0015696: ammonium transport2.63E-04
19GO:0071484: cellular response to light intensity2.63E-04
20GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.63E-04
21GO:0071805: potassium ion transmembrane transport3.27E-04
22GO:0015994: chlorophyll metabolic process3.53E-04
23GO:0072488: ammonium transmembrane transport3.53E-04
24GO:0010117: photoprotection4.50E-04
25GO:0009904: chloroplast accumulation movement4.50E-04
26GO:0010236: plastoquinone biosynthetic process4.50E-04
27GO:0009643: photosynthetic acclimation5.51E-04
28GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway5.51E-04
29GO:0034599: cellular response to oxidative stress6.27E-04
30GO:0009903: chloroplast avoidance movement6.58E-04
31GO:0010189: vitamin E biosynthetic process6.58E-04
32GO:0009648: photoperiodism6.58E-04
33GO:0071470: cellular response to osmotic stress6.58E-04
34GO:0070370: cellular heat acclimation7.69E-04
35GO:0009644: response to high light intensity8.26E-04
36GO:0009932: cell tip growth1.00E-03
37GO:0009585: red, far-red light phototransduction1.01E-03
38GO:0009909: regulation of flower development1.12E-03
39GO:0034765: regulation of ion transmembrane transport1.13E-03
40GO:0009409: response to cold1.27E-03
41GO:0006995: cellular response to nitrogen starvation1.39E-03
42GO:0009641: shade avoidance1.39E-03
43GO:0009970: cellular response to sulfate starvation1.39E-03
44GO:0006810: transport1.43E-03
45GO:0016485: protein processing1.53E-03
46GO:0009773: photosynthetic electron transport in photosystem I1.53E-03
47GO:0005986: sucrose biosynthetic process1.82E-03
48GO:0007015: actin filament organization1.97E-03
49GO:0010223: secondary shoot formation1.97E-03
50GO:0009266: response to temperature stimulus1.97E-03
51GO:0006071: glycerol metabolic process2.29E-03
52GO:0008299: isoprenoid biosynthetic process2.62E-03
53GO:0009739: response to gibberellin2.71E-03
54GO:0010017: red or far-red light signaling pathway2.97E-03
55GO:0042391: regulation of membrane potential3.71E-03
56GO:0009658: chloroplast organization3.73E-03
57GO:0042752: regulation of circadian rhythm4.11E-03
58GO:0009723: response to ethylene4.30E-03
59GO:0019252: starch biosynthetic process4.31E-03
60GO:0016126: sterol biosynthetic process5.81E-03
61GO:0015995: chlorophyll biosynthetic process6.50E-03
62GO:0009751: response to salicylic acid6.69E-03
63GO:0018298: protein-chromophore linkage6.98E-03
64GO:0008219: cell death6.98E-03
65GO:0009753: response to jasmonic acid7.28E-03
66GO:0046686: response to cadmium ion7.97E-03
67GO:0006865: amino acid transport7.97E-03
68GO:0006631: fatty acid metabolic process9.28E-03
69GO:0042542: response to hydrogen peroxide9.55E-03
70GO:0031347: regulation of defense response1.12E-02
71GO:0009737: response to abscisic acid1.19E-02
72GO:0006813: potassium ion transport1.21E-02
73GO:0009416: response to light stimulus1.21E-02
74GO:0010224: response to UV-B1.24E-02
75GO:0045893: positive regulation of transcription, DNA-templated1.39E-02
76GO:0042744: hydrogen peroxide catabolic process2.00E-02
77GO:0016036: cellular response to phosphate starvation2.18E-02
78GO:0006979: response to oxidative stress2.47E-02
79GO:0010468: regulation of gene expression2.60E-02
80GO:0009733: response to auxin2.75E-02
81GO:0015979: photosynthesis4.01E-02
82GO:0045454: cell redox homeostasis4.15E-02
83GO:0045892: negative regulation of transcription, DNA-templated4.19E-02
84GO:0016042: lipid catabolic process4.71E-02
85GO:0006281: DNA repair4.81E-02
86GO:0009408: response to heat4.81E-02
RankGO TermAdjusted P value
1GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
2GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity0.00E+00
3GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
4GO:0004419: hydroxymethylglutaryl-CoA lyase activity0.00E+00
5GO:0009976: tocopherol cyclase activity0.00E+00
6GO:0000989: transcription factor activity, transcription factor binding2.33E-05
7GO:0019904: protein domain specific binding4.16E-05
8GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity4.18E-05
9GO:0035671: enone reductase activity4.18E-05
10GO:0015173: aromatic amino acid transmembrane transporter activity1.04E-04
11GO:0050347: trans-octaprenyltranstransferase activity1.04E-04
12GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity1.04E-04
13GO:0050307: sucrose-phosphate phosphatase activity1.78E-04
14GO:0004096: catalase activity1.78E-04
15GO:0010277: chlorophyllide a oxygenase [overall] activity1.78E-04
16GO:0004373: glycogen (starch) synthase activity1.78E-04
17GO:0003913: DNA photolyase activity1.78E-04
18GO:0015175: neutral amino acid transmembrane transporter activity2.63E-04
19GO:0009011: starch synthase activity3.53E-04
20GO:0004506: squalene monooxygenase activity3.53E-04
21GO:0051538: 3 iron, 4 sulfur cluster binding4.50E-04
22GO:0008519: ammonium transmembrane transporter activity5.51E-04
23GO:0005242: inward rectifier potassium channel activity6.58E-04
24GO:0009881: photoreceptor activity7.69E-04
25GO:0030674: protein binding, bridging8.84E-04
26GO:0008889: glycerophosphodiester phosphodiesterase activity1.13E-03
27GO:0016887: ATPase activity1.57E-03
28GO:0015079: potassium ion transmembrane transporter activity2.62E-03
29GO:0005249: voltage-gated potassium channel activity3.71E-03
30GO:0030551: cyclic nucleotide binding3.71E-03
31GO:0010181: FMN binding4.11E-03
32GO:0016853: isomerase activity4.11E-03
33GO:0016791: phosphatase activity5.15E-03
34GO:0005215: transporter activity5.16E-03
35GO:0004721: phosphoprotein phosphatase activity6.50E-03
36GO:0050897: cobalt ion binding7.72E-03
37GO:0030145: manganese ion binding7.72E-03
38GO:0051537: 2 iron, 2 sulfur cluster binding1.04E-02
39GO:0016298: lipase activity1.24E-02
40GO:0015171: amino acid transmembrane transporter activity1.30E-02
41GO:0008270: zinc ion binding1.33E-02
42GO:0016874: ligase activity1.49E-02
43GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen1.86E-02
44GO:0016829: lyase activity1.93E-02
45GO:0003700: transcription factor activity, sequence-specific DNA binding2.28E-02
46GO:0042802: identical protein binding2.72E-02
47GO:0000287: magnesium ion binding3.09E-02
48GO:0050660: flavin adenine dinucleotide binding3.47E-02
49GO:0005515: protein binding4.38E-02
50GO:0004722: protein serine/threonine phosphatase activity4.43E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast8.89E-06
2GO:0009569: chloroplast starch grain1.04E-04
3GO:0042651: thylakoid membrane1.07E-04
4GO:0010319: stromule3.27E-04
5GO:0031982: vesicle8.84E-04
6GO:0009570: chloroplast stroma9.43E-04
7GO:0009514: glyoxysome1.00E-03
8GO:0009706: chloroplast inner membrane1.42E-03
9GO:0010287: plastoglobule1.68E-03
10GO:0009941: chloroplast envelope2.06E-03
11GO:0005777: peroxisome2.22E-03
12GO:0009534: chloroplast thylakoid2.37E-03
13GO:0009535: chloroplast thylakoid membrane2.72E-03
14GO:0009532: plastid stroma2.80E-03
15GO:0005887: integral component of plasma membrane9.22E-03
16GO:0005759: mitochondrial matrix2.14E-02
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Gene type



Gene DE type