gene detail

Gene description

TAIR ID: AT5G23820

Short description: MD-2-related lipid recognition domain-containing protein

Pathogen responsiveness: NA

General responsiveness: -0.37

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

defense response

GO cellular component

ER body, plant-type vacuole, vacuole, extracellular region

GO molecular function

protein binding

Protein domain

Pfam	PF02221, ML domain
SMART	SM00737, ML

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT4G34680, AT2G45050, AT3G60530

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view

Differentially expressed condition

15 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.51	7.68E-05
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	1.55	2.84E-03
GSE17464	Laer, control	Laer, PstDC3000 12 h	2.02	2.17E-02
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	2.78	8.84E-04
GSE17464	Penta, control	Penta, PstDC3000 12 h	2.09	1.39E-02
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.83	1.66E-03
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.19	7.63E-03
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.73	3.33E-02
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.35	3.00E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-1.97	3.55E-02
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.43	1.06E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-2.47	8.32E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	4.37	7.13E-05
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	-2.59	7.02E-07
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.60	2.96E-03