Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G23820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080094: response to trehalose-6-phosphate0.00E+00
2GO:0010430: fatty acid omega-oxidation0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0090393: sepal giant cell development0.00E+00
6GO:0006573: valine metabolic process0.00E+00
7GO:0071370: cellular response to gibberellin stimulus0.00E+00
8GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
9GO:0015822: ornithine transport0.00E+00
10GO:2000122: negative regulation of stomatal complex development3.35E-05
11GO:0006546: glycine catabolic process3.35E-05
12GO:0010037: response to carbon dioxide3.35E-05
13GO:0015976: carbon utilization3.35E-05
14GO:0045490: pectin catabolic process1.02E-04
15GO:0017148: negative regulation of translation1.10E-04
16GO:1901259: chloroplast rRNA processing1.10E-04
17GO:0007155: cell adhesion1.85E-04
18GO:0006169: adenosine salvage2.16E-04
19GO:1901349: glucosinolate transport2.16E-04
20GO:0090449: phloem glucosinolate loading2.16E-04
21GO:0010442: guard cell morphogenesis2.16E-04
22GO:1901599: (-)-pinoresinol biosynthetic process2.16E-04
23GO:0006551: leucine metabolic process2.16E-04
24GO:0000066: mitochondrial ornithine transport2.16E-04
25GO:0019510: S-adenosylhomocysteine catabolic process2.16E-04
26GO:0055114: oxidation-reduction process3.42E-04
27GO:0046686: response to cadmium ion4.30E-04
28GO:0006695: cholesterol biosynthetic process4.81E-04
29GO:1902326: positive regulation of chlorophyll biosynthetic process4.81E-04
30GO:0033353: S-adenosylmethionine cycle4.81E-04
31GO:0010069: zygote asymmetric cytokinesis in embryo sac4.81E-04
32GO:1904143: positive regulation of carotenoid biosynthetic process4.81E-04
33GO:0030388: fructose 1,6-bisphosphate metabolic process4.81E-04
34GO:2000123: positive regulation of stomatal complex development4.81E-04
35GO:0010424: DNA methylation on cytosine within a CG sequence4.81E-04
36GO:0043039: tRNA aminoacylation4.81E-04
37GO:0052541: plant-type cell wall cellulose metabolic process4.81E-04
38GO:0042742: defense response to bacterium5.52E-04
39GO:0010020: chloroplast fission6.57E-04
40GO:0019253: reductive pentose-phosphate cycle6.57E-04
41GO:0005985: sucrose metabolic process7.34E-04
42GO:0006000: fructose metabolic process7.83E-04
43GO:0071492: cellular response to UV-A7.83E-04
44GO:0006065: UDP-glucuronate biosynthetic process7.83E-04
45GO:0090506: axillary shoot meristem initiation7.83E-04
46GO:0006631: fatty acid metabolic process8.05E-04
47GO:0009617: response to bacterium9.24E-04
48GO:0043572: plastid fission1.12E-03
49GO:0032877: positive regulation of DNA endoreduplication1.12E-03
50GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.12E-03
51GO:0007231: osmosensory signaling pathway1.12E-03
52GO:0006730: one-carbon metabolic process1.18E-03
53GO:0006810: transport1.28E-03
54GO:0009294: DNA mediated transformation1.29E-03
55GO:0033500: carbohydrate homeostasis1.48E-03
56GO:2000038: regulation of stomatal complex development1.48E-03
57GO:0009694: jasmonic acid metabolic process1.48E-03
58GO:0006542: glutamine biosynthetic process1.48E-03
59GO:0019676: ammonia assimilation cycle1.48E-03
60GO:0071486: cellular response to high light intensity1.48E-03
61GO:0019464: glycine decarboxylation via glycine cleavage system1.48E-03
62GO:0009765: photosynthesis, light harvesting1.48E-03
63GO:0010375: stomatal complex patterning1.89E-03
64GO:0016120: carotene biosynthetic process1.89E-03
65GO:0016123: xanthophyll biosynthetic process1.89E-03
66GO:0044209: AMP salvage1.89E-03
67GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.99E-03
68GO:0071554: cell wall organization or biogenesis2.17E-03
69GO:0010583: response to cyclopentenone2.31E-03
70GO:0015979: photosynthesis2.31E-03
71GO:0016554: cytidine to uridine editing2.33E-03
72GO:0006796: phosphate-containing compound metabolic process2.33E-03
73GO:0010190: cytochrome b6f complex assembly2.33E-03
74GO:0009117: nucleotide metabolic process2.33E-03
75GO:0006555: methionine metabolic process2.33E-03
76GO:0045454: cell redox homeostasis2.49E-03
77GO:0007267: cell-cell signaling2.78E-03
78GO:0010067: procambium histogenesis2.80E-03
79GO:0009082: branched-chain amino acid biosynthetic process2.80E-03
80GO:0009099: valine biosynthetic process2.80E-03
81GO:0010555: response to mannitol2.80E-03
82GO:0009955: adaxial/abaxial pattern specification2.80E-03
83GO:0050790: regulation of catalytic activity3.30E-03
84GO:0008610: lipid biosynthetic process3.82E-03
85GO:0009642: response to light intensity3.82E-03
86GO:0006875: cellular metal ion homeostasis3.82E-03
87GO:0052543: callose deposition in cell wall3.82E-03
88GO:0009817: defense response to fungus, incompatible interaction4.06E-03
89GO:0048193: Golgi vesicle transport4.38E-03
90GO:0009097: isoleucine biosynthetic process4.38E-03
91GO:0032544: plastid translation4.38E-03
92GO:0006002: fructose 6-phosphate metabolic process4.38E-03
93GO:0010119: regulation of stomatal movement4.69E-03
94GO:0010206: photosystem II repair4.95E-03
95GO:0045337: farnesyl diphosphate biosynthetic process4.95E-03
96GO:0033384: geranyl diphosphate biosynthetic process4.95E-03
97GO:0048589: developmental growth4.95E-03
98GO:0016051: carbohydrate biosynthetic process5.14E-03
99GO:0006349: regulation of gene expression by genetic imprinting5.56E-03
100GO:1900865: chloroplast RNA modification5.56E-03
101GO:0035999: tetrahydrofolate interconversion5.56E-03
102GO:0006839: mitochondrial transport5.86E-03
103GO:0051555: flavonol biosynthetic process6.18E-03
104GO:0043069: negative regulation of programmed cell death6.18E-03
105GO:0006816: calcium ion transport6.84E-03
106GO:0009089: lysine biosynthetic process via diaminopimelate6.84E-03
107GO:0009773: photosynthetic electron transport in photosystem I6.84E-03
108GO:0009807: lignan biosynthetic process6.84E-03
109GO:0018119: peptidyl-cysteine S-nitrosylation6.84E-03
110GO:0010216: maintenance of DNA methylation6.84E-03
111GO:0009658: chloroplast organization7.01E-03
112GO:0009735: response to cytokinin7.14E-03
113GO:0009644: response to high light intensity7.17E-03
114GO:0045037: protein import into chloroplast stroma7.51E-03
115GO:0009651: response to salt stress7.72E-03
116GO:0050826: response to freezing8.22E-03
117GO:0009725: response to hormone8.22E-03
118GO:0006094: gluconeogenesis8.22E-03
119GO:0009767: photosynthetic electron transport chain8.22E-03
120GO:0005986: sucrose biosynthetic process8.22E-03
121GO:0010207: photosystem II assembly8.94E-03
122GO:0010223: secondary shoot formation8.94E-03
123GO:0070588: calcium ion transmembrane transport9.69E-03
124GO:0006071: glycerol metabolic process1.05E-02
125GO:0007010: cytoskeleton organization1.12E-02
126GO:0019344: cysteine biosynthetic process1.12E-02
127GO:0006418: tRNA aminoacylation for protein translation1.21E-02
128GO:0010026: trichome differentiation1.21E-02
129GO:0009695: jasmonic acid biosynthetic process1.21E-02
130GO:0007017: microtubule-based process1.21E-02
131GO:0042545: cell wall modification1.24E-02
132GO:0031408: oxylipin biosynthetic process1.29E-02
133GO:0061077: chaperone-mediated protein folding1.29E-02
134GO:0009742: brassinosteroid mediated signaling pathway1.35E-02
135GO:0080092: regulation of pollen tube growth1.37E-02
136GO:0019748: secondary metabolic process1.37E-02
137GO:0030245: cellulose catabolic process1.37E-02
138GO:0001944: vasculature development1.46E-02
139GO:0006284: base-excision repair1.55E-02
140GO:0010089: xylem development1.55E-02
141GO:0016117: carotenoid biosynthetic process1.64E-02
142GO:0008152: metabolic process1.71E-02
143GO:0000271: polysaccharide biosynthetic process1.74E-02
144GO:0080022: primary root development1.74E-02
145GO:0000413: protein peptidyl-prolyl isomerization1.74E-02
146GO:0010087: phloem or xylem histogenesis1.74E-02
147GO:0015991: ATP hydrolysis coupled proton transport1.74E-02
148GO:0045489: pectin biosynthetic process1.83E-02
149GO:0009741: response to brassinosteroid1.83E-02
150GO:0015986: ATP synthesis coupled proton transport1.93E-02
151GO:0007059: chromosome segregation1.93E-02
152GO:0009646: response to absence of light1.93E-02
153GO:0019252: starch biosynthetic process2.02E-02
154GO:0016032: viral process2.23E-02
155GO:0032502: developmental process2.23E-02
156GO:0007264: small GTPase mediated signal transduction2.23E-02
157GO:0071555: cell wall organization2.36E-02
158GO:0016126: sterol biosynthetic process2.76E-02
159GO:0009788: negative regulation of abscisic acid-activated signaling pathway2.87E-02
160GO:0010411: xyloglucan metabolic process3.10E-02
161GO:0009611: response to wounding3.20E-02
162GO:0018298: protein-chromophore linkage3.34E-02
163GO:0048767: root hair elongation3.46E-02
164GO:0009813: flavonoid biosynthetic process3.46E-02
165GO:0009409: response to cold3.68E-02
166GO:0007568: aging3.70E-02
167GO:0009910: negative regulation of flower development3.70E-02
168GO:0009867: jasmonic acid mediated signaling pathway3.95E-02
169GO:0005975: carbohydrate metabolic process4.33E-02
170GO:0042542: response to hydrogen peroxide4.59E-02
171GO:0006508: proteolysis4.70E-02
172GO:0009744: response to sucrose4.73E-02
173GO:0051707: response to other organism4.73E-02
174GO:0042546: cell wall biogenesis4.86E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
3GO:0045435: lycopene epsilon cyclase activity0.00E+00
4GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
5GO:0030795: jasmonate O-methyltransferase activity0.00E+00
6GO:0102078: methyl jasmonate methylesterase activity0.00E+00
7GO:0030598: rRNA N-glycosylase activity0.00E+00
8GO:0051920: peroxiredoxin activity1.39E-06
9GO:0016209: antioxidant activity3.46E-06
10GO:0030570: pectate lyase activity9.54E-05
11GO:0080132: fatty acid alpha-hydroxylase activity2.16E-04
12GO:0004831: tyrosine-tRNA ligase activity2.16E-04
13GO:0003984: acetolactate synthase activity2.16E-04
14GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity2.16E-04
15GO:0010313: phytochrome binding2.16E-04
16GO:0015088: copper uptake transmembrane transporter activity2.16E-04
17GO:0004001: adenosine kinase activity2.16E-04
18GO:0090448: glucosinolate:proton symporter activity2.16E-04
19GO:0044715: 8-oxo-dGDP phosphatase activity2.16E-04
20GO:0042349: guiding stereospecific synthesis activity2.16E-04
21GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.16E-04
22GO:0004560: alpha-L-fucosidase activity2.16E-04
23GO:0004013: adenosylhomocysteinase activity2.16E-04
24GO:0004575: sucrose alpha-glucosidase activity3.31E-04
25GO:0046593: mandelonitrile lyase activity4.81E-04
26GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity4.81E-04
27GO:0000064: L-ornithine transmembrane transporter activity4.81E-04
28GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase4.81E-04
29GO:0004618: phosphoglycerate kinase activity4.81E-04
30GO:0004047: aminomethyltransferase activity4.81E-04
31GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity4.81E-04
32GO:0004089: carbonate dehydratase activity5.83E-04
33GO:0070330: aromatase activity7.83E-04
34GO:0005504: fatty acid binding7.83E-04
35GO:0003913: DNA photolyase activity7.83E-04
36GO:0004148: dihydrolipoyl dehydrogenase activity7.83E-04
37GO:0070402: NADPH binding7.83E-04
38GO:0003979: UDP-glucose 6-dehydrogenase activity7.83E-04
39GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.60E-04
40GO:0035529: NADH pyrophosphatase activity1.12E-03
41GO:0048027: mRNA 5'-UTR binding1.12E-03
42GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.12E-03
43GO:0001872: (1->3)-beta-D-glucan binding1.12E-03
44GO:0004375: glycine dehydrogenase (decarboxylating) activity1.12E-03
45GO:0098599: palmitoyl hydrolase activity1.48E-03
46GO:0045430: chalcone isomerase activity1.48E-03
47GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.48E-03
48GO:0030599: pectinesterase activity1.86E-03
49GO:0018685: alkane 1-monooxygenase activity1.89E-03
50GO:0004356: glutamate-ammonia ligase activity1.89E-03
51GO:0008725: DNA-3-methyladenine glycosylase activity1.89E-03
52GO:0016462: pyrophosphatase activity2.33E-03
53GO:0042578: phosphoric ester hydrolase activity2.33E-03
54GO:0008200: ion channel inhibitor activity2.33E-03
55GO:0080030: methyl indole-3-acetate esterase activity2.33E-03
56GO:0008474: palmitoyl-(protein) hydrolase activity2.33E-03
57GO:0019843: rRNA binding2.67E-03
58GO:0016722: oxidoreductase activity, oxidizing metal ions2.78E-03
59GO:0005200: structural constituent of cytoskeleton2.78E-03
60GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.80E-03
61GO:0051753: mannan synthase activity2.80E-03
62GO:0016832: aldehyde-lyase activity2.80E-03
63GO:0003886: DNA (cytosine-5-)-methyltransferase activity2.80E-03
64GO:0016413: O-acetyltransferase activity2.95E-03
65GO:0009881: photoreceptor activity3.30E-03
66GO:0004427: inorganic diphosphatase activity3.30E-03
67GO:0016491: oxidoreductase activity3.44E-03
68GO:0005507: copper ion binding3.80E-03
69GO:0004564: beta-fructofuranosidase activity3.82E-03
70GO:0008889: glycerophosphodiester phosphodiesterase activity4.95E-03
71GO:0004337: geranyltranstransferase activity4.95E-03
72GO:0005381: iron ion transmembrane transporter activity5.56E-03
73GO:0004185: serine-type carboxypeptidase activity6.63E-03
74GO:0005089: Rho guanyl-nucleotide exchange factor activity6.84E-03
75GO:0004860: protein kinase inhibitor activity6.84E-03
76GO:0046961: proton-transporting ATPase activity, rotational mechanism6.84E-03
77GO:0004161: dimethylallyltranstransferase activity6.84E-03
78GO:0004601: peroxidase activity7.01E-03
79GO:0016788: hydrolase activity, acting on ester bonds7.18E-03
80GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.74E-03
81GO:0051287: NAD binding8.03E-03
82GO:0004565: beta-galactosidase activity8.22E-03
83GO:0005262: calcium channel activity8.22E-03
84GO:0045330: aspartyl esterase activity9.91E-03
85GO:0052689: carboxylic ester hydrolase activity1.05E-02
86GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.09E-02
87GO:0005528: FK506 binding1.12E-02
88GO:0004176: ATP-dependent peptidase activity1.29E-02
89GO:0033612: receptor serine/threonine kinase binding1.29E-02
90GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.37E-02
91GO:0008810: cellulase activity1.46E-02
92GO:0022891: substrate-specific transmembrane transporter activity1.46E-02
93GO:0003924: GTPase activity1.51E-02
94GO:0016758: transferase activity, transferring hexosyl groups1.56E-02
95GO:0004812: aminoacyl-tRNA ligase activity1.64E-02
96GO:0005102: receptor binding1.64E-02
97GO:0005525: GTP binding1.73E-02
98GO:0016829: lyase activity1.73E-02
99GO:0004872: receptor activity2.02E-02
100GO:0019901: protein kinase binding2.02E-02
101GO:0016762: xyloglucan:xyloglucosyl transferase activity2.12E-02
102GO:0048038: quinone binding2.12E-02
103GO:0004518: nuclease activity2.23E-02
104GO:0008194: UDP-glycosyltransferase activity2.47E-02
105GO:0008483: transaminase activity2.54E-02
106GO:0008237: metallopeptidase activity2.54E-02
107GO:0016787: hydrolase activity2.60E-02
108GO:0016597: amino acid binding2.65E-02
109GO:0042802: identical protein binding2.81E-02
110GO:0016168: chlorophyll binding2.87E-02
111GO:0030247: polysaccharide binding3.10E-02
112GO:0016798: hydrolase activity, acting on glycosyl bonds3.10E-02
113GO:0008236: serine-type peptidase activity3.22E-02
114GO:0004222: metalloendopeptidase activity3.58E-02
115GO:0050897: cobalt ion binding3.70E-02
116GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.70E-02
117GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.95E-02
118GO:0050660: flavin adenine dinucleotide binding3.95E-02
119GO:0004672: protein kinase activity4.13E-02
120GO:0030246: carbohydrate binding4.48E-02
RankGO TermAdjusted P value
1GO:0005948: acetolactate synthase complex0.00E+00
2GO:0009571: proplastid stroma0.00E+00
3GO:0000940: condensed chromosome outer kinetochore0.00E+00
4GO:0009579: thylakoid5.53E-13
5GO:0048046: apoplast2.51E-10
6GO:0009570: chloroplast stroma4.64E-10
7GO:0009507: chloroplast1.29E-09
8GO:0009535: chloroplast thylakoid membrane5.39E-09
9GO:0009941: chloroplast envelope9.53E-08
10GO:0009543: chloroplast thylakoid lumen1.90E-07
11GO:0005576: extracellular region3.07E-06
12GO:0009505: plant-type cell wall8.59E-06
13GO:0031225: anchored component of membrane8.93E-06
14GO:0005775: vacuolar lumen1.83E-05
15GO:0046658: anchored component of plasma membrane2.06E-05
16GO:0009654: photosystem II oxygen evolving complex6.27E-05
17GO:0031977: thylakoid lumen8.48E-05
18GO:0009534: chloroplast thylakoid1.61E-04
19GO:0009344: nitrite reductase complex [NAD(P)H]2.16E-04
20GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)2.78E-04
21GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain4.81E-04
22GO:0005618: cell wall4.94E-04
23GO:0030095: chloroplast photosystem II6.57E-04
24GO:0005960: glycine cleavage complex1.12E-03
25GO:0005773: vacuole1.12E-03
26GO:0031897: Tic complex1.48E-03
27GO:0019898: extrinsic component of membrane2.03E-03
28GO:0010319: stromule2.78E-03
29GO:0009533: chloroplast stromal thylakoid3.30E-03
30GO:0009539: photosystem II reaction center4.38E-03
31GO:0000325: plant-type vacuole4.69E-03
32GO:0045298: tubulin complex4.95E-03
33GO:0005763: mitochondrial small ribosomal subunit4.95E-03
34GO:0005876: spindle microtubule5.56E-03
35GO:0016324: apical plasma membrane6.18E-03
36GO:0030176: integral component of endoplasmic reticulum membrane9.69E-03
37GO:0005753: mitochondrial proton-transporting ATP synthase complex9.69E-03
38GO:0005875: microtubule associated complex1.05E-02
39GO:0042651: thylakoid membrane1.21E-02
40GO:0016020: membrane1.24E-02
41GO:0009706: chloroplast inner membrane1.28E-02
42GO:0009532: plastid stroma1.29E-02
43GO:0009506: plasmodesma1.32E-02
44GO:0009523: photosystem II2.02E-02
45GO:0005615: extracellular space2.47E-02
46GO:0022626: cytosolic ribosome2.94E-02
47GO:0005829: cytosol3.17E-02
48GO:0009536: plastid3.19E-02
49GO:0005874: microtubule4.09E-02
50GO:0031902: late endosome membrane4.46E-02
Gene type



Gene DE type