Gene: AT5G20250
     

Gene description


TAIR ID: AT5G20250

Short description: Raffinose synthase family protein

Pathogen responsiveness: -0.21

General responsiveness: 0.89

Orthologous


Rice:

OS06G0172800  

Maize:

GRMZM2G127147  

Wheat: No orthologous gene

GO biological process


response to karrikin, response to oxidative stress, carbohydrate metabolic process, response to cold


GO cellular component


plasmodesma, chloroplast, cytoplasm


GO molecular function


catalytic activity, hydrolase activity, hydrolyzing O-glycosyl compounds, galactinol-sucrose galactosyltransferase activity


Protein domain


PfamPF05691, Raffinose synthase or seed imbibition protein Sip1

Transcriptional regulation


Regulator:
AT5G13790, AT4G36920, AT1G24260, AT4G31800

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


18 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-1.762.11E-02
GSE17464Laer, controlLaer, PstDC3000 12 h-1.574.77E-02
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.381.17E-03
GSE17464Penta, controlPenta, PstDC3000 12 h-1.891.10E-02
GSE26206Col, WT, controlCol, WT, R.solani_AG2_1 7 d-1.671.86E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.644.17E-11
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.392.00E-10
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h-1.657.79E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h2.653.27E-11
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.148.26E-13
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.014.03E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.743.95E-02
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.911.73E-07
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h-2.178.64E-06
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h-2.192.91E-06
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-2.318.15E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.997.28E-06
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.181.40E-05






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