gene detail

Gene description

TAIR ID: AT5G18670

Short description: beta-amylase 3

Pathogen responsiveness: 0.32

General responsiveness: -0.04

Orthologous

Rice:

Maize:

Wheat: No orthologous gene

GO biological process

polysaccharide catabolic process

GO cellular component

cytoplasm, chloroplast

GO molecular function

beta-amylase activity

Protein domain

Pfam	PF01373, Glycosyl hydrolase family 14

Metabolic pathway

PWY-6724: starch degradation II

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G31800

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

Differentially expressed condition

21 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	3.46	2.58E-02
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	2.73	3.42E-10
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	2.59	1.37E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.56	4.57E-08
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-1.57	2.99E-09
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-1.57	1.01E-06
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.67	1.85E-08
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.68	2.51E-07
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-1.73	2.57E-05
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.76	3.79E-09

Showing 1 to 10 of 21 entries