gene detail

Gene description

TAIR ID: AT5G17860

Short description: calcium exchanger 7

Pathogen responsiveness: 1.25

General responsiveness: 0.38

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

sodium ion transport, potassium ion transport, transmembrane transport, cation transport

GO cellular component

integral component of membrane, vacuolar membrane

GO molecular function

cation:cation antiporter activity, calcium:sodium antiporter activity, antiporter activity

Protein domain

Pfam	PF01699, Sodium/calcium exchanger protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

40 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	2.89	1.53E-09
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	2.30	7.28E-09
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 1 h	-1.50	3.50E-03
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	-1.60	5.76E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-1.92	3.33E-05
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.85	5.81E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.08	1.45E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.20	1.26E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.51	2.19E-10
GSE26679	Col, WT, GC 0 h	Col, WT, GC 96 h	2.06	2.27E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.72	4.08E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 96 h	2.16	1.09E-06
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-1.75	1.73E-02
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.89	1.35E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	4.17	3.70E-12
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.27	4.38E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	3.11	3.49E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	4.38	2.09E-12
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	3.45	7.52E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.20	3.20E-12
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.36	8.67E-10
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	4.31	2.92E-11
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.26	1.06E-11
GSE45214	Col, npr1, PstDC3000 AvrRpt2 0 h	Col, npr1, PstDC3000 AvrRpt2 4 h	3.85	1.68E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	5.80	1.29E-07
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	4.46	1.07E-06
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.51	3.24E-03
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.06	3.79E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.70	1.45E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	2.79	1.30E-12
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.97	8.85E-07
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.30	2.52E-09
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.76	7.63E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	1.99	1.70E-07
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	2.30	1.87E-09
GSE5616	Col, WT, water 12 h	Col, WT, P. infestans 12 h	2.97	1.32E-06
GSE5616	Col, WT, water 24 h	Col, WT, P. infestans 24 h	1.57	5.79E-04
GSE5616	Col, WT, water 6 h	Col, WT, P. infestans 6 h	2.88	5.93E-07
GSE5685	Col, WT, control 24 h	Col, WT, Ps ES4326 24 h	1.60	1.40E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	2.28	7.09E-06