Gene: AT5G17850
     


Gene description


TAIR ID: AT5G17850

Short description: Sodium/calcium exchanger family protein

Pathogen responsiveness: -0.25

General responsiveness: 0.51

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


potassium ion transport, transmembrane transport, sodium ion transport, cation transport


GO cellular component


integral component of membrane


GO molecular function


cation:cation antiporter activity, antiporter activity, calcium:sodium antiporter activity


Protein domain


PfamPF01699, Sodium/calcium exchanger protein

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


13 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h3.632.29E-05
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h3.791.15E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.532.95E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.983.94E-06
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.401.99E-05
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt21.991.15E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV2.029.57E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.627.15E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.825.36E-11
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.661.25E-08
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h1.955.09E-10
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.752.31E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.823.50E-08






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