Gene: AT5G17600
     


Gene description


TAIR ID: AT5G17600

Short description: RING/U-box superfamily protein

Pathogen responsiveness: -0.46

General responsiveness: -0.18

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G004480   GRMZM2G090279  

Wheat: No orthologous gene

GO biological process


protein ubiquitination


GO cellular component


nucleus, integral component of membrane


GO molecular function


metal ion binding


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT1G13450, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Flg22 2 h-1.877.01E-03
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.581.04E-03
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h-1.763.01E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.666.11E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.686.56E-08
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.112.31E-03
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.632.17E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.865.72E-14
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.723.59E-03
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h-1.791.33E-06
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min1.662.36E-02






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