gene detail

Gene description

TAIR ID: AT5G16570

Short description: glutamine synthetase 1;4

Pathogen responsiveness: -0.56

General responsiveness: -1.00

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

glutamine biosynthetic process, nitrogen fixation, nitrate assimilation

GO cellular component

cytoplasm, cytosol

GO molecular function

ATP binding, glutamate-ammonia ligase activity, protein binding

Protein domain

Pfam	PF00120, Glutamine synthetase, catalytic domain
Pfam	PF03951, Glutamine synthetase, beta-Grasp domain
SMART	SM01230, Gln-synt_C

Metabolic pathway

KEGG pathway

Transcriptional regulation

Regulator:
AT5G61850, AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 3

Coexpression network

GSE5686_WT_GO view
GSE56094_WT_PSTDC3000 view

Differentially expressed condition

13 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.03	1.58E-02
GSE11807	Col, erf104 ko, water 4 h	Col, erf104 ko, Flg22 4 h	1.80	4.81E-02
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	2.08	3.04E-02
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	2.13	3.00E-03
GSE17464	Laer, control	Laer, Flg22 2 h	1.96	2.52E-03
GSE17464	Penta, control	Penta, Flg22 2 h	2.53	1.36E-04
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.52	1.82E-02
GSE56094	Col, WT, control 4 h	Col, WT, PstDC3000 4 h	1.92	8.60E-07
GSE56094	Col, WT, control 6 h	Col, WT, hrpA- 6 h	1.88	1.90E-06
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.67	1.39E-05
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.51	3.67E-04
GSE5615	Col, WT, water 4 h	Col, WT, Flg22 4 h	2.37	3.17E-07
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.49	6.15E-08