Gene: AT5G16560
     

Gene description


TAIR ID: AT5G16560

Short description: Homeodomain-like superfamily protein

Pathogen responsiveness: -1.39

General responsiveness: -1.51

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G082264  

Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, xylem and phloem pattern formation, animal organ morphogenesis, radial pattern formation, transcription, adaxial/abaxial axis specification, plant ovule development, polarity specification of adaxial/abaxial axis, abaxial cell fate specification, carpel development


GO cellular component


nucleus


GO molecular function


transcription regulatory region DNA binding, transcription factor activity, sequence-specific DNA binding, protein binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT2G34710, AT3G24050, AT1G30490, AT1G24260, AT1G65620, AT5G61850

Target:
AT1G73590, AT1G65620

Protein-protein interaction network


The number of partners (degree) is: 28 (Top5%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


7 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h2.286.14E-07
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.598.52E-05
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h2.546.51E-08
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.302.88E-03
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.731.52E-02
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.912.80E-03
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.661.16E-02






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