gene detail

Gene description

TAIR ID: AT5G16340

Short description: AMP-dependent synthetase and ligase family protein

Pathogen responsiveness: -1.11

General responsiveness: -0.54

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

fatty acid metabolic process

GO cellular component

chloroplast

GO molecular function

ligase activity

Protein domain

Pfam	PF13193, AMP-binding enzyme C-terminal domain
Pfam	PF00501, AMP-binding enzyme

Metabolic pathway

PWY-6443: benzoate biosynthesis I (CoA-dependent, β-oxidative)
PWY-283: benzoate degradation II (aerobic and anaerobic)

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE13739_EDS16_GO view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	1.73	3.79E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.86	1.02E-05
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.91	1.48E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	1.88	7.24E-09
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.67	2.87E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.06	9.33E-03
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	-1.55	2.35E-05