Gene: AT5G15310
     


Gene description


TAIR ID: AT5G15310

Short description: myb domain protein 16

Pathogen responsiveness: 0.29

General responsiveness: 1.17

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


cell morphogenesis, response to jasmonic acid, regulation of transcription, DNA-templated, cell differentiation, transcription, cuticle pattern formation, response to salicylic acid, response to ethylene, response to gibberellin, response to salt stress, regulation of transcription from RNA polymerase II promoter, response to cadmium ion, regulation of cutin biosynthetic process, response to auxin


GO cellular component


nucleus


GO molecular function


DNA binding, RNA polymerase II transcription factor activity, sequence-specific DNA binding, transcription factor activity, RNA polymerase II transcription factor recruiting, transcription regulatory region DNA binding


Protein domain


PfamPF00249, Myb-like DNA-binding domain
SMARTSM00717, SANT

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36920, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


24 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, ataf1, controlCol, ataf1, Bg h-1.722.04E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h-1.864.37E-04
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h-1.922.91E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.691.21E-10
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.881.83E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.795.32E-09
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.658.40E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-2.961.37E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.638.97E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-2.665.48E-12
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-2.091.90E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-2.053.09E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.751.35E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h-1.901.20E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h-2.493.56E-03
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h-1.564.02E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h-1.581.99E-07
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h-1.961.05E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h-2.001.75E-04
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-2.412.02E-03
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h-1.641.47E-04
GSE67100pDMR6:GFP GFP-negative, control 7 dpDMR6:GFP GFP-positive, Hpa Noks1 7 d-5.721.35E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h-1.911.24E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h-1.931.32E-02






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