gene detail

Gene description

TAIR ID: AT5G14460

Short description: Pseudouridine synthase family protein

Pathogen responsiveness: -1.28

General responsiveness: -0.31

Orthologous

Rice: No orthologous gene

Maize:

Wheat:

GO biological process

RNA modification

GO cellular component

nucleus

GO molecular function

transporter activity, RNA binding, pseudouridine synthase activity

Protein domain

Pfam	PF01509, TruB family pseudouridylate synthase (N terminal domain)
Pfam	PF16198, tRNA pseudouridylate synthase B C-terminal domain

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G62300, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

Coexpression network

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-1.51	6.33E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.51	2.57E-13