Gene: AT5G14420
     

Gene description


TAIR ID: AT5G14420

Short description: RING domain ligase2

Pathogen responsiveness: -1.06

General responsiveness: -1.46

GO biological process


abscisic acid-activated signaling pathway, cytokinin metabolic process, negative regulation of response to water deprivation, auxin metabolic process


GO cellular component


plasma membrane, nucleus


GO molecular function


metal ion binding, ubiquitin-protein transferase activity, protein binding


Protein domain


PfamPF13920, Zinc finger, C3HC4 type (RING finger)
PfamPF07002, Copine
SMARTSM00327, VWA

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G56110, AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition


11 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.262.87E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.546.49E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.906.79E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.551.02E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.432.87E-18
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.642.48E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.133.67E-15
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.534.43E-09
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.653.15E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.272.91E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.861.21E-03






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