Gene: AT5G14420

Gene description

TAIR ID: AT5G14420

Short description: RING domain ligase2

Pathogen responsiveness: -1.06

General responsiveness: -1.46

GO biological process

abscisic acid-activated signaling pathway, cytokinin metabolic process, negative regulation of response to water deprivation, auxin metabolic process

GO cellular component

plasma membrane, nucleus

GO molecular function

metal ion binding, ubiquitin-protein transferase activity, protein binding

Protein domain

PfamPF13920, Zinc finger, C3HC4 type (RING finger)
PfamPF07002, Copine

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

AT5G56110, AT5G13790, AT1G24260


Protein-protein interaction network

The number of partners (degree) is: 3

click to view PPI network

Differentially expressed condition

11 conditions

SeriesControlTreatmentLog2FCAdj. P value
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h2.262.87E-08
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.546.49E-08
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.906.79E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h1.551.02E-03
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.432.87E-18
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h1.642.48E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h2.133.67E-15
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h1.534.43E-09
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h1.653.15E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h2.272.91E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.861.21E-03

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