gene detail

Gene description

TAIR ID: AT5G13820

Short description: telomeric DNA binding protein 1

Pathogen responsiveness: 0.46

General responsiveness: -0.00

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, telomere maintenance, telomeric loop formation, transcription

GO cellular component

nuclear telomere cap complex, nucleus, chromosome, telomeric region

GO molecular function

protein binding

Protein domain

SMART

SM00717, SANT

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT2G43010, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE56094_WT_HRPA-  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

25 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.20	5.10E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.18	3.77E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.38	2.39E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	3.95	2.31E-11
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.53	2.77E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	2.37	1.81E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.89	9.50E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	2.20	3.38E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	1.92	1.69E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	2.22	2.37E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	3.09	4.80E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.67	1.36E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	3.90	9.80E-19
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.96	2.54E-06
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	2.70	5.10E-11
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	1.88	4.47E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	3.14	1.62E-13
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	1.66	1.25E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.74	1.48E-17
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	1.68	8.90E-05
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.85	9.10E-06
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	2.96	2.30E-12
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	3.19	1.72E-13
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	1.87	8.16E-06
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.33	2.69E-04