Gene: AT5G13420
Gene description
TAIR ID: AT5G13420
Short description: Aldolase-type TIM barrel family protein
Pathogen responsiveness: -0.32
General responsiveness: 0.44
GO biological process
pentose-phosphate shunt, shikimate biosynthetic process, lignin biosynthetic process, response to cadmium ion, carbohydrate metabolic process
GO cellular component
chloroplast stroma, mitochondrion, chloroplast, plastid
GO molecular function
sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity
Metabolic pathway
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch)
PENTOSE-P-PWY: pentose phosphate pathway
PWY-5723: Rubisco shunt
KEGG pathway
PATH:ath01200: Carbon metabolism
PATH:ath01230: Biosynthesis of amino acids
PATH:ath00030: Pentose phosphate pathway
Transcriptional regulation
No regulation information
click to view PPI networkCoexpression network
Differentially expressed condition 
16 conditions
| Series | Control | Treatment | Log2FC | Adj. P value |
|---|---|---|---|---|
| GSE11807 | Col, WT, water 4 h | Col, WT, Flg22 4 h | 2.49 | 1.89E-02 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 12 h | 1.56 | 3.34E-11 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 4 h | 1.88 | 2.80E-12 |
| GSE45212 | Col, med14, PstDC3000 AvrRpt2 0 h | Col, med14, PstDC3000 AvrRpt2 8 h | 1.80 | 3.64E-12 |
| GSE45214 | Col, med16, PstDC3000 AvrRpt2 0 h | Col, med16, PstDC3000 AvrRpt2 4 h | 1.75 | 9.60E-14 |
| GSE50526 | Col, WT, mock 24 h | Col, WT, A. brassicicola 24 h | 2.14 | 5.68E-05 |
| GSE56094 | Col, WT, control 10 h | Col, WT, hrpA- 10 h | 2.04 | 3.90E-12 |
| GSE56094 | Col, WT, control 11 h | Col, WT, hrpA- 11 h | 1.85 | 5.62E-11 |
| GSE56094 | Col, WT, control 13 h | Col, WT, hrpA- 13 h | 1.58 | 2.24E-08 |
| GSE56094 | Col, WT, control 8 h | Col, WT, hrpA- 8 h | 1.77 | 4.87E-10 |
| GSE56094 | Col, WT, control 9 h | Col, WT, PstDC3000 9 h | 1.61 | 1.21E-09 |
| GSE56094 | Col, WT, control 9 h | Col, WT, hrpA- 9 h | 1.79 | 2.63E-10 |
| GSE5615 | Col, WT, water 4 h | Col, WT, HrpZ 4 h | 1.53 | 1.24E-09 |
| GSE58954 | Col, WT, Psm AvrRpt2 0 h | Col, WT, Psm AvrRpt2 6 h | 1.84 | 8.78E-03 |
| GSE6176 | Col, WT, control 12 h | Col, WT, PstDC3000 HrpA- 12 h | 1.54 | 5.25E-04 |
| GSE9674 | Ws-4, AtMYB30 ox, control | Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h | 1.51 | 6.05E-03 |
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