co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G13420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043201: response to leucine	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0080053: response to phenylalanine	0.00E+00
4	GO:1900409: positive regulation of cellular response to oxidative stress	0.00E+00
5	GO:0009423: chorismate biosynthetic process	1.16E-07
6	GO:0009073: aromatic amino acid family biosynthetic process	1.54E-06
7	GO:0006007: glucose catabolic process	7.90E-05
8	GO:1901430: positive regulation of syringal lignin biosynthetic process	7.90E-05
9	GO:0009968: negative regulation of signal transduction	7.90E-05
10	GO:0009820: alkaloid metabolic process	7.90E-05
11	GO:0043547: positive regulation of GTPase activity	7.90E-05
12	GO:0006099: tricarboxylic acid cycle	1.09E-04
13	GO:0019632: shikimate metabolic process	1.89E-04
14	GO:0010163: high-affinity potassium ion import	1.89E-04
15	GO:0042939: tripeptide transport	1.89E-04
16	GO:1990069: stomatal opening	1.89E-04
17	GO:0015802: basic amino acid transport	1.89E-04
18	GO:0009805: coumarin biosynthetic process	1.89E-04
19	GO:0051262: protein tetramerization	1.89E-04
20	GO:0080147: root hair cell development	2.34E-04
21	GO:0008652: cellular amino acid biosynthetic process	3.17E-04
22	GO:0052325: cell wall pectin biosynthetic process	3.17E-04
23	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	3.17E-04
24	GO:0001676: long-chain fatty acid metabolic process	4.58E-04
25	GO:0009058: biosynthetic process	5.09E-04
26	GO:0033356: UDP-L-arabinose metabolic process	6.09E-04
27	GO:0030007: cellular potassium ion homeostasis	6.09E-04
28	GO:0042938: dipeptide transport	6.09E-04
29	GO:0033320: UDP-D-xylose biosynthetic process	6.09E-04
30	GO:0051365: cellular response to potassium ion starvation	6.09E-04
31	GO:0006413: translational initiation	6.54E-04
32	GO:0006564: L-serine biosynthetic process	7.72E-04
33	GO:0009228: thiamine biosynthetic process	9.42E-04
34	GO:0042732: D-xylose metabolic process	9.42E-04
35	GO:0015977: carbon fixation	1.12E-03
36	GO:0071669: plant-type cell wall organization or biogenesis	1.31E-03
37	GO:0050829: defense response to Gram-negative bacterium	1.31E-03
38	GO:1900057: positive regulation of leaf senescence	1.31E-03
39	GO:0009651: response to salt stress	1.36E-03
40	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	1.51E-03
41	GO:0010497: plasmodesmata-mediated intercellular transport	1.72E-03
42	GO:0022900: electron transport chain	1.72E-03
43	GO:0034765: regulation of ion transmembrane transport	1.95E-03
44	GO:0006754: ATP biosynthetic process	1.95E-03
45	GO:2000280: regulation of root development	2.18E-03
46	GO:0009809: lignin biosynthetic process	2.27E-03
47	GO:0009737: response to abscisic acid	2.29E-03
48	GO:0006857: oligopeptide transport	2.43E-03
49	GO:0009682: induced systemic resistance	2.66E-03
50	GO:0006352: DNA-templated transcription, initiation	2.66E-03
51	GO:0006096: glycolytic process	2.68E-03
52	GO:0009753: response to jasmonic acid	2.85E-03
53	GO:0006807: nitrogen compound metabolic process	3.18E-03
54	GO:0006108: malate metabolic process	3.18E-03
55	GO:0009887: animal organ morphogenesis	3.45E-03
56	GO:0009225: nucleotide-sugar metabolic process	3.73E-03
57	GO:0009409: response to cold	4.58E-03
58	GO:0003333: amino acid transmembrane transport	4.92E-03
59	GO:0016226: iron-sulfur cluster assembly	5.24E-03
60	GO:0030245: cellulose catabolic process	5.24E-03
61	GO:0009611: response to wounding	5.54E-03
62	GO:0046686: response to cadmium ion	5.66E-03
63	GO:0006817: phosphate ion transport	5.89E-03
64	GO:0042127: regulation of cell proliferation	5.89E-03
65	GO:0010089: xylem development	5.89E-03
66	GO:0008284: positive regulation of cell proliferation	6.22E-03
67	GO:0042391: regulation of membrane potential	6.57E-03
68	GO:0034220: ion transmembrane transport	6.57E-03
69	GO:0010118: stomatal movement	6.57E-03
70	GO:0015991: ATP hydrolysis coupled proton transport	6.57E-03
71	GO:0010182: sugar mediated signaling pathway	6.92E-03
72	GO:0055085: transmembrane transport	7.29E-03
73	GO:0009749: response to glucose	7.64E-03
74	GO:0010193: response to ozone	8.01E-03
75	GO:0010029: regulation of seed germination	1.08E-02
76	GO:0030244: cellulose biosynthetic process	1.25E-02
77	GO:0009832: plant-type cell wall biogenesis	1.29E-02
78	GO:0006869: lipid transport	1.40E-02
79	GO:0030154: cell differentiation	1.47E-02
80	GO:0009751: response to salicylic acid	1.55E-02
81	GO:0006839: mitochondrial transport	1.62E-02
82	GO:0006631: fatty acid metabolic process	1.67E-02
83	GO:0009640: photomorphogenesis	1.77E-02
84	GO:0008283: cell proliferation	1.77E-02
85	GO:0008643: carbohydrate transport	1.87E-02
86	GO:0009664: plant-type cell wall organization	2.08E-02
87	GO:0042538: hyperosmotic salinity response	2.08E-02
88	GO:0006810: transport	2.15E-02
89	GO:0006486: protein glycosylation	2.19E-02
90	GO:0048367: shoot system development	2.52E-02
91	GO:0009735: response to cytokinin	2.55E-02
92	GO:0009620: response to fungus	2.63E-02
93	GO:0042545: cell wall modification	2.75E-02
94	GO:0009555: pollen development	2.79E-02
95	GO:0009624: response to nematode	2.81E-02
96	GO:0007275: multicellular organism development	3.09E-02
97	GO:0042744: hydrogen peroxide catabolic process	3.62E-02
98	GO:0009793: embryo development ending in seed dormancy	3.78E-02
99	GO:0016036: cellular response to phosphate starvation	3.94E-02
100	GO:0040008: regulation of growth	4.01E-02
101	GO:0045490: pectin catabolic process	4.14E-02
102	GO:0007166: cell surface receptor signaling pathway	4.56E-02
103	GO:0009617: response to bacterium	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0008281: sulfonylurea receptor activity	0.00E+00
3	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
4	GO:0052636: arabinosyltransferase activity	0.00E+00
5	GO:0003856: 3-dehydroquinate synthase activity	0.00E+00
6	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
7	GO:0008746: NAD(P)+ transhydrogenase activity	7.90E-05
8	GO:0004128: cytochrome-b5 reductase activity, acting on NAD(P)H	7.90E-05
9	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	7.90E-05
10	GO:0030371: translation repressor activity	7.90E-05
11	GO:0015114: phosphate ion transmembrane transporter activity	1.45E-04
12	GO:0008083: growth factor activity	1.65E-04
13	GO:0052691: UDP-arabinopyranose mutase activity	1.89E-04
14	GO:0019172: glyoxalase III activity	1.89E-04
15	GO:0042937: tripeptide transporter activity	1.89E-04
16	GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity	1.89E-04
17	GO:0008964: phosphoenolpyruvate carboxylase activity	3.17E-04
18	GO:0042409: caffeoyl-CoA O-methyltransferase activity	3.17E-04
19	GO:0004108: citrate (Si)-synthase activity	4.58E-04
20	GO:0019201: nucleotide kinase activity	4.58E-04
21	GO:0016866: intramolecular transferase activity	6.09E-04
22	GO:0004930: G-protein coupled receptor activity	6.09E-04
23	GO:0042936: dipeptide transporter activity	6.09E-04
24	GO:0003743: translation initiation factor activity	8.64E-04
25	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	9.42E-04
26	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	9.42E-04
27	GO:0016615: malate dehydrogenase activity	9.42E-04
28	GO:0048040: UDP-glucuronate decarboxylase activity	9.42E-04
29	GO:0102391: decanoate--CoA ligase activity	1.12E-03
30	GO:0030060: L-malate dehydrogenase activity	1.12E-03
31	GO:0004017: adenylate kinase activity	1.12E-03
32	GO:0004656: procollagen-proline 4-dioxygenase activity	1.12E-03
33	GO:0005242: inward rectifier potassium channel activity	1.12E-03
34	GO:0070403: NAD+ binding	1.12E-03
35	GO:0030145: manganese ion binding	1.21E-03
36	GO:0004467: long-chain fatty acid-CoA ligase activity	1.31E-03
37	GO:0004033: aldo-keto reductase (NADP) activity	1.51E-03
38	GO:0008135: translation factor activity, RNA binding	1.72E-03
39	GO:0015293: symporter activity	1.90E-03
40	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.95E-03
41	GO:0030955: potassium ion binding	2.18E-03
42	GO:0016844: strictosidine synthase activity	2.18E-03
43	GO:0004743: pyruvate kinase activity	2.18E-03
44	GO:0008171: O-methyltransferase activity	2.41E-03
45	GO:0008559: xenobiotic-transporting ATPase activity	2.66E-03
46	GO:0015198: oligopeptide transporter activity	2.92E-03
47	GO:0004022: alcohol dehydrogenase (NAD) activity	3.18E-03
48	GO:0005315: inorganic phosphate transmembrane transporter activity	3.18E-03
49	GO:0051536: iron-sulfur cluster binding	4.31E-03
50	GO:0008810: cellulase activity	5.56E-03
51	GO:0016760: cellulose synthase (UDP-forming) activity	5.56E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	5.56E-03
53	GO:0008514: organic anion transmembrane transporter activity	5.89E-03
54	GO:0030551: cyclic nucleotide binding	6.57E-03
55	GO:0005249: voltage-gated potassium channel activity	6.57E-03
56	GO:0005199: structural constituent of cell wall	6.92E-03
57	GO:0010181: FMN binding	7.28E-03
58	GO:0000287: magnesium ion binding	8.39E-03
59	GO:0016788: hydrolase activity, acting on ester bonds	8.71E-03
60	GO:0015250: water channel activity	1.04E-02
61	GO:0005096: GTPase activator activity	1.29E-02
62	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.38E-02
63	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.48E-02
64	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.57E-02
65	GO:0051539: 4 iron, 4 sulfur cluster binding	1.62E-02
66	GO:0050661: NADP binding	1.62E-02
67	GO:0008289: lipid binding	2.19E-02
68	GO:0015171: amino acid transmembrane transporter activity	2.35E-02
69	GO:0045330: aspartyl esterase activity	2.35E-02
70	GO:0016887: ATPase activity	2.44E-02
71	GO:0045735: nutrient reservoir activity	2.46E-02
72	GO:0030599: pectinesterase activity	2.69E-02
73	GO:0022857: transmembrane transporter activity	2.69E-02
74	GO:0030170: pyridoxal phosphate binding	3.55E-02
75	GO:0015144: carbohydrate transmembrane transporter activity	3.75E-02
76	GO:0005515: protein binding	3.93E-02
77	GO:0046910: pectinesterase inhibitor activity	3.94E-02
78	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.94E-02
79	GO:0005351: sugar:proton symporter activity	4.08E-02
80	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	2.81E-07
2	GO:0005774: vacuolar membrane	1.49E-06
3	GO:0005886: plasma membrane	5.61E-06
4	GO:0005802: trans-Golgi network	6.11E-06
5	GO:0005768: endosome	9.22E-06
6	GO:0005829: cytosol	1.43E-05
7	GO:0005618: cell wall	2.03E-05
8	GO:0009506: plasmodesma	6.44E-05
9	GO:0000138: Golgi trans cisterna	7.90E-05
10	GO:0030130: clathrin coat of trans-Golgi network vesicle	3.17E-04
11	GO:0030132: clathrin coat of coated pit	3.17E-04
12	GO:0009530: primary cell wall	3.17E-04
13	GO:0031597: cytosolic proteasome complex	1.12E-03
14	GO:0009570: chloroplast stroma	1.55E-03
15	GO:0048046: apoplast	1.60E-03
16	GO:0008180: COP9 signalosome	1.95E-03
17	GO:0005740: mitochondrial envelope	2.41E-03
18	GO:0005852: eukaryotic translation initiation factor 3 complex	2.66E-03
19	GO:0031307: integral component of mitochondrial outer membrane	2.92E-03
20	GO:0031012: extracellular matrix	3.18E-03
21	GO:0005773: vacuole	3.38E-03
22	GO:0005795: Golgi stack	3.73E-03
23	GO:0005887: integral component of plasma membrane	3.84E-03
24	GO:0009505: plant-type cell wall	4.07E-03
25	GO:0009532: plastid stroma	4.92E-03
26	GO:0005741: mitochondrial outer membrane	4.92E-03
27	GO:0005576: extracellular region	5.30E-03
28	GO:0031965: nuclear membrane	7.64E-03
29	GO:0071944: cell periphery	8.77E-03
30	GO:0005737: cytoplasm	9.37E-03
31	GO:0010319: stromule	9.56E-03
32	GO:0009707: chloroplast outer membrane	1.25E-02
33	GO:0000325: plant-type vacuole	1.38E-02
34	GO:0009536: plastid	1.71E-02
35	GO:0005783: endoplasmic reticulum	1.80E-02
36	GO:0010008: endosome membrane	2.52E-02
37	GO:0016020: membrane	2.71E-02
38	GO:0009543: chloroplast thylakoid lumen	3.30E-02
39	GO:0005759: mitochondrial matrix	3.88E-02
40	GO:0031225: anchored component of membrane	4.34E-02
41	GO:0005615: extracellular space	4.49E-02
42	GO:0016021: integral component of membrane	4.99E-02