Gene: AT5G13330
     


Gene description


TAIR ID: AT5G13330

Short description: related to AP2 6l

Pathogen responsiveness: 1.68

General responsiveness: 1.67

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G309731  

Wheat:

TAAFFX.23008.1.S1_AT  


GO biological process


response to salt stress, glucosinolate metabolic process, response to water deprivation, response to salicylic acid, transcription, DNA-templated, positive regulation of transcription, regulation of transcription, response to abscisic acid, ethylene-activated signaling pathway, cellular response to freezing, response to jasmonic acid, response to ethylene


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00847, AP2 domain
SMARTSM00380, AP2

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


55 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-3.692.60E-15
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d-2.361.32E-08
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h2.666.51E-06
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h2.801.65E-06
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h3.361.08E-06
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.747.60E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h5.231.28E-11
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA1.687.49E-03
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d1.873.28E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.563.27E-04
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h1.677.73E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h2.446.15E-04
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.886.01E-03
GSE26679Col, WT, GC 0 hCol, WT, GC 96 h2.431.68E-03
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h3.526.12E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h3.455.65E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 96 h3.081.09E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt23.221.63E-04
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.981.66E-05
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 AvrRpt22.214.06E-03
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV3.155.30E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h4.382.50E-13
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.296.08E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h3.547.36E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.496.91E-12
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.811.85E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.231.87E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h3.049.87E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.814.44E-11
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h4.381.70E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.804.78E-09
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h2.901.28E-04
GSE50526Col, WT, mock 9 hCol, WT, A. brassicicola 9 h1.912.35E-03
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.706.92E-05
GSE5520Col, WT, control 24 hCol, WT, PsDC3118 Cor- 24 h1.811.46E-02
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h3.702.13E-06
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h2.627.20E-06
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h2.906.71E-13
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.411.10E-08
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h2.853.28E-12
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.712.07E-10
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h2.986.55E-13
GSE56094Col, WT, control 12 hCol, WT, hrpA- 12 h1.697.10E-05
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.021.88E-13
GSE56094Col, WT, control 13 hCol, WT, hrpA- 13 h2.071.18E-06
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h2.022.95E-07
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h1.511.79E-04
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h2.688.52E-11
GSE56094Col, WT, control 9 hCol, WT, hrpA- 9 h2.152.66E-07
GSE5615Col, WT, GST 4 hCol, WT, GST+NPP1 4 h1.573.32E-06
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h3.322.37E-05
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.322.14E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h3.226.09E-04
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 2-4 h1.681.73E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h3.355.45E-04






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