Gene: AT5G13300
     

Gene description


TAIR ID: AT5G13300

Short description: ARF GTPase-activating protein

Pathogen responsiveness: -1.72

General responsiveness: -3.69

Orthologous


Rice:

OS09G0510700   OS02G0632500  

Maize:

GRMZM2G059225  

Wheat: No orthologous gene

GO biological process


response to auxin, endocytosis, xylem and phloem pattern formation, leaf morphogenesis, phloem or xylem histogenesis


GO cellular component


plasma membrane, trans-Golgi network transport vesicle, Golgi apparatus, cytosol


GO molecular function


protein binding, GTPase activator activity, metal ion binding


Protein domain


PfamPF13637, Ankyrin repeats (many copies)
PfamPF00169, PH domain
PfamPF16746, BAR domain of APPL family
PfamPF01412, Putative GTPase activating protein for Arf
SMARTSM00721, BAR
SMARTSM00248, ANK
SMARTSM00105, ArfGap
SMARTSM00233, PH

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Differentially expressed condition


4 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE26679Col, WT, GC 0 hCol, WT, GC 18 h1.521.73E-08
GSE26679Col, WT, GC 0 hCol, WT, GC 36 h1.663.00E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 18 h1.634.39E-09
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.862.41E-10






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