Gene: AT5G13220
     


Gene description


TAIR ID: AT5G13220

Short description: jasmonate-zim-domain protein 10

Pathogen responsiveness: 2.02

General responsiveness: 1.00

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, response to wounding, transcription, response to jasmonic acid, negative regulation of nucleic acid-templated transcription, regulation of jasmonic acid mediated signaling pathway, regulation of systemic acquired resistance, defense response


GO cellular component


nucleus


GO molecular function


protein binding, protein homodimerization activity, transcription corepressor activity


Protein domain


PfamPF09425, Divergent CCT motif
PfamPF06200, tify domain
SMARTSM00979, TIFY

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 25 (Top10%)

click to view PPI network

Differentially expressed condition


49 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h3.221.88E-06
GSE12856Col, ataf1, controlCol, ataf1, Bg h3.447.43E-07
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d-2.752.67E-04
GSE17500Col, 35S:AFB1, control 0 hCol, 35S:AFB1, PstDC3000 24 h4.135.92E-07
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h4.361.10E-07
GSE17500Col, miR393, control 0 hCol, miR393, PstDC3000 24 h4.412.78E-07
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.716.81E-10
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h6.353.05E-12
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.715.29E-03
GSE21920Col, WT, mockCol, WT, Pto HopZ1a C216aA 6 h1.954.91E-03
GSE21920Col, WT, mockCol, WT, Pto 6 h1.981.81E-02
GSE21920Col, ulp1, mockCol, ulp1, Pto 6 h2.311.62E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 AvrRpt22.221.84E-03
GSE40544Col, WT, controlCol, WT, PstDC3000 EV3.888.35E-06
GSE40544Col, Sid2, controlCol, Sid2, PstDC3000 EV3.291.54E-04
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h3.777.91E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h4.841.02E-11
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h4.232.04E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.964.22E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h3.691.34E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.719.46E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h2.971.99E-07
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h4.436.78E-10
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h5.281.76E-11
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.874.34E-07
GSE50526Col, WT, mock 24 hCol, WT, A. brassicicola 24 h3.382.92E-02
GSE52979Col, WT, acetoneCol, WT, acetone flg22_2 h2.422.00E-05
GSE52979Col, WT, oxo_C14_HSLCol, WT, oxo_C14_HSL flg22_2 h2.675.53E-06
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h2.845.61E-04
GSE5520Col, WT, control 24 hCol, WT, PstDC3000 24 h6.605.82E-09
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h4.713.47E-08
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h4.661.95E-17
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h2.261.49E-05
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h4.275.79E-15
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h2.442.77E-06
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h3.492.37E-11
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h3.852.69E-13
GSE56094Col, WT, control 5 hCol, WT, PstDC3000 5 h2.739.21E-07
GSE56094Col, WT, control 6 hCol, WT, PstDC3000 6 h3.022.19E-08
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h3.561.05E-10
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h1.681.80E-03
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h3.829.92E-13
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h3.209.70E-10
GSE5615Col, WT, water 4 hCol, WT, HrpZ 4 h1.652.71E-03
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.233.09E-02
GSE6176Col, WT, control 12 hCol, WT, PstDC3000 12 h3.262.41E-03
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h2.591.75E-02
GSE9674Ws-4, AtMYB30 ox, controlWs-4, AtMYB30 ox, Xanthomonas strain Xcc147 90-105 min2.712.38E-02
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 90-105 min2.162.18E-02






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