gene detail

Gene description

TAIR ID: AT5G11310

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: -2.97

General responsiveness: -2.22

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G107437

Wheat: No orthologous gene

GO biological process

RNA modification, negative regulation of abscisic acid-activated signaling pathway, seed germination, regulation of seed germination

GO cellular component

mitochondrion, cytosol, nucleus

GO molecular function

RNA binding, endonuclease activity

Protein domain

Pfam	PF13041, PPR repeat family
Pfam	PF01535, PPR repeat

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

No coexpression gene

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.05	5.85E-04