Gene: AT5G10380
     

Gene description


TAIR ID: AT5G10380

Short description: RING/U-box superfamily protein

Pathogen responsiveness: 0.48

General responsiveness: 1.45

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


protein autoubiquitination, protein ubiquitination, response to chitin, proteasome-mediated ubiquitin-dependent protein catabolic process, response to bacterium, defense response, positive regulation of programmed cell death, programmed cell death, response to molecule of fungal origin


GO cellular component


plasma membrane, integral component of membrane, extracellular region


GO molecular function


ubiquitin-protein transferase activity, metal ion binding, ubiquitin protein ligase activity


Protein domain


PfamPF13639, Ring finger domain
SMARTSM00184, RING

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 4

click to view PPI network

Differentially expressed condition


27 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE13739Col, WT, control 7 dCol, WT, G.orontii 7 d2.281.98E-12
GSE17464Penta, controlPenta, PstDC3000 12 h2.317.17E-04
GSE17500Col, WT, control 0 hCol, WT, PstDC3000 24 h1.541.22E-03
GSE18329Col, WT, controlCol, WT, Hpa noco2 96 h1.776.03E-12
GSE18329Col, wrky72_1, controlCol, wrky72_1, Hpa noco2 96 h2.647.04E-15
GSE18329Col, wrky72_1, controlCol, wrky72_2, Hpa noco2 96 h2.685.61E-15
GSE20278Col, RPL18-HF, control, polysomal RNACol, RPL18-HF, TuMV 10 d, polysomal RNA2.159.12E-04
GSE20278Col, RPL18-HF, controlCol, RPL18-HF, TuMV 10 d2.403.85E-04
GSE37921Col, WT, controlCol, WT, CMV2.968.90E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h2.692.87E-08
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h2.119.00E-07
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h3.722.92E-10
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.871.33E-08
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h3.496.36E-10
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.911.59E-10
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.534.94E-09
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.218.05E-12
GSE45214Col, npr1, PstDC3000 AvrRpt2 0 hCol, npr1, PstDC3000 AvrRpt2 4 h2.261.98E-11
GSE5520Col, WT, control 10 hCol, WT, Cor- 10 h1.651.31E-02
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.561.12E-02
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-2.008.76E-04
GSE5686Col, WT, control 5 dCol, WT, G.orontii 5 d1.722.41E-05
GSE6556Col, WT, controlCol, WT, PstDC3000 AvrRpt2 48 h2.267.56E-05
GSE6556Col, gh3.5, controlCol, gh3.5, PstDC3000 AvrRpt2 48 h2.337.29E-06
GSE73351Ws-4, map65_3, controlWs-4, map65_3, H.ara Emwa1 3 d2.191.27E-03
GSE8319Col, WT, controlCol, WT, chitooctaose 30 min2.115.74E-13
GSE9674Ws-4, WT, controlWs-4, WT, Xanthomonas strain Xcc147 6 h1.902.42E-04






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