gene detail

Gene description

TAIR ID: AT5G10290

Short description: leucine-rich repeat transmembrane protein kinase family protein

Pathogen responsiveness: -0.98

General responsiveness: -1.24

Orthologous

Rice:

OS02G0283800

Maize:

AC217401.3_FGT003

Wheat:

TAAFFX.110793.1.S1_AT

GO biological process

unkown

GO cellular component

plasma membrane, integral component of membrane

GO molecular function

kinase activity, ATP binding

Protein domain

Pfam	PF08263, Leucine rich repeat N-terminal domain
Pfam	PF00560, Leucine Rich Repeat
Pfam	PF00069, Protein kinase domain
SMART	SM00369, LRR_TYP
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G53660, AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 44 (Top5%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.89	1.78E-05
GSE18329	Col, wrky72_1, control	Col, wrky72_1, Hpa noco2 96 h	1.74	6.50E-10
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.56	1.17E-07
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.89	1.17E-02
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.72	1.44E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.64	2.56E-11
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.62	1.22E-03