Gene: AT5G09920
     


Gene description


TAIR ID: AT5G09920

Short description: RNA polymerase II, Rpb4, core protein

Pathogen responsiveness: -3.33

General responsiveness: -2.82

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G119393  

Wheat:

TA.608.1.S1_AT  TA.608.1.S1_X_AT  


GO biological process


recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex, mRNA export from nucleus in response to heat stress, nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, transcription initiation from RNA polymerase II promoter, positive regulation of translational initiation, transcription from RNA polymerase II promoter


GO cellular component


DNA-directed RNA polymerase II, core complex, P-body, nucleus


GO molecular function


translation initiation factor binding, DNA-directed 5'-3' RNA polymerase activity, nucleotide binding, single-stranded RNA binding, single-stranded DNA binding


Protein domain


PfamPF03874, RNA polymerase Rpb4
SMARTSM00657, RPOL4c

Metabolic pathway


Not involved in metabolic pathway


Transcriptional regulation


Regulator:
AT3G16857, AT4G16110, AT4G18770

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 1

click to view PPI network

Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.