Gene: AT5G04560
     

Gene description


TAIR ID: AT5G04560

Short description: HhH-GPD base excision DNA repair family protein

Pathogen responsiveness: -3.11

General responsiveness: -3.84

Orthologous


Rice:

OS01G0218032  

Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


base-excision repair, DNA methylation, regulation of transcription, DNA-templated, regulation of gene expression by genetic imprinting, transcription, embryo development ending in seed dormancy


GO cellular component


nucleus


GO molecular function


DNA binding, DNA N-glycosylase activity, 4 iron, 4 sulfur cluster binding, metal ion binding, DNA-(apurinic or apyrimidinic site) lyase activity


Protein domain


PfamPF15629, Permuted single zf-CXXC unit
PfamPF15628, RRM in Demeter
SMARTSM00478, ENDO3c
SMARTSM00525, FES

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G48670

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 7

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


Copyright © 2017 Ziding Zhang's Lab - China Agricultural University. All Rights Reserved.