gene detail

Gene description

TAIR ID: AT5G04530

Short description: 3-ketoacyl-CoA synthase 19

Pathogen responsiveness: -0.75

General responsiveness: 1.41

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

response to light stimulus, response to cold, fatty acid biosynthetic process

GO cellular component

integral component of membrane, extracellular region

GO molecular function

3-oxo-arachidoyl-CoA synthase activity, 3-oxo-cerotoyl-CoA synthase activity, 3-oxo-lignoceronyl-CoA synthase activity, very-long-chain 3-ketoacyl-CoA synthase activity, transferase activity, transferring acyl groups

Protein domain

Pfam	PF08541, 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Pfam	PF08392, FAE1/Type III polyketide synthase-like protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath00062: Fatty acid elongation

Transcriptional regulation

Regulator:
AT3G16857, AT4G16110, AT2G43010

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE26679_WT_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-2.55	3.16E-04
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.89	1.59E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-2.75	4.70E-06
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-1.62	6.74E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-2.96	2.13E-06
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.56	6.73E-06
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.78	3.47E-03
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.73	2.53E-06