gene detail

Gene description

TAIR ID: AT5G04410

Short description: NAC domain containing protein 2

Pathogen responsiveness: -1.66

General responsiveness: -1.22

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G340305 GRMZM2G113950

Wheat: No orthologous gene

GO biological process

regulation of flavonoid biosynthetic process, positive regulation of transcription, DNA-templated, response to high light intensity, multicellular organism development, transcription

GO cellular component

nucleus, integral component of membrane, cytoplasm

GO molecular function

DNA binding, transcription factor activity, sequence-specific DNA binding

Protein domain

Pfam	PF02365, No apical meristem (NAM) protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

No regulation information

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.73	4.49E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.74	7.05E-04