co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04410

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0046167: glycerol-3-phosphate biosynthetic process	6.74E-05
3	GO:1902000: homogentisate catabolic process	1.62E-04
4	GO:0046740: transport of virus in host, cell to cell	1.62E-04
5	GO:0031648: protein destabilization	1.62E-04
6	GO:0071395: cellular response to jasmonic acid stimulus	1.62E-04
7	GO:0006641: triglyceride metabolic process	1.62E-04
8	GO:0019374: galactolipid metabolic process	1.62E-04
9	GO:0019563: glycerol catabolic process	2.75E-04
10	GO:0009072: aromatic amino acid family metabolic process	2.75E-04
11	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	2.75E-04
12	GO:0042631: cellular response to water deprivation	3.54E-04
13	GO:0006468: protein phosphorylation	3.96E-04
14	GO:0010071: root meristem specification	3.98E-04
15	GO:0006072: glycerol-3-phosphate metabolic process	3.98E-04
16	GO:0009399: nitrogen fixation	3.98E-04
17	GO:0006891: intra-Golgi vesicle-mediated transport	4.70E-04
18	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	5.32E-04
19	GO:0010188: response to microbial phytotoxin	5.32E-04
20	GO:0006542: glutamine biosynthetic process	5.32E-04
21	GO:0030041: actin filament polymerization	6.73E-04
22	GO:0018344: protein geranylgeranylation	6.73E-04
23	GO:0009617: response to bacterium	6.82E-04
24	GO:0010555: response to mannitol	9.79E-04
25	GO:2000067: regulation of root morphogenesis	9.79E-04
26	GO:0009094: L-phenylalanine biosynthetic process	9.79E-04
27	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.14E-03
28	GO:0006401: RNA catabolic process	1.14E-03
29	GO:0071446: cellular response to salicylic acid stimulus	1.14E-03
30	GO:0010078: maintenance of root meristem identity	1.32E-03
31	GO:0010492: maintenance of shoot apical meristem identity	1.32E-03
32	GO:0006644: phospholipid metabolic process	1.32E-03
33	GO:0007186: G-protein coupled receptor signaling pathway	1.50E-03
34	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.69E-03
35	GO:0048268: clathrin coat assembly	1.89E-03
36	GO:0016310: phosphorylation	2.01E-03
37	GO:0006896: Golgi to vacuole transport	2.10E-03
38	GO:0009750: response to fructose	2.31E-03
39	GO:0030148: sphingolipid biosynthetic process	2.31E-03
40	GO:0000266: mitochondrial fission	2.53E-03
41	GO:0055046: microgametogenesis	2.76E-03
42	GO:0002237: response to molecule of bacterial origin	2.99E-03
43	GO:0010053: root epidermal cell differentiation	3.23E-03
44	GO:0042343: indole glucosinolate metabolic process	3.23E-03
45	GO:0010167: response to nitrate	3.23E-03
46	GO:0006874: cellular calcium ion homeostasis	3.99E-03
47	GO:0098542: defense response to other organism	4.26E-03
48	GO:0040008: regulation of growth	4.28E-03
49	GO:0031348: negative regulation of defense response	4.53E-03
50	GO:0010017: red or far-red light signaling pathway	4.53E-03
51	GO:0071215: cellular response to abscisic acid stimulus	4.81E-03
52	GO:0009561: megagametogenesis	5.09E-03
53	GO:0007166: cell surface receptor signaling pathway	5.11E-03
54	GO:0010468: regulation of gene expression	5.34E-03
55	GO:0080022: primary root development	5.68E-03
56	GO:0042391: regulation of membrane potential	5.68E-03
57	GO:0071472: cellular response to salt stress	5.98E-03
58	GO:0009749: response to glucose	6.60E-03
59	GO:0071554: cell wall organization or biogenesis	6.91E-03
60	GO:0006464: cellular protein modification process	7.90E-03
61	GO:0006952: defense response	8.36E-03
62	GO:0080167: response to karrikin	8.57E-03
63	GO:0046777: protein autophosphorylation	9.17E-03
64	GO:0042128: nitrate assimilation	9.65E-03
65	GO:0048573: photoperiodism, flowering	1.00E-02
66	GO:0006886: intracellular protein transport	1.06E-02
67	GO:0009407: toxin catabolic process	1.15E-02
68	GO:0016042: lipid catabolic process	1.23E-02
69	GO:0006897: endocytosis	1.44E-02
70	GO:0006631: fatty acid metabolic process	1.44E-02
71	GO:0009744: response to sucrose	1.52E-02
72	GO:0051707: response to other organism	1.52E-02
73	GO:0000209: protein polyubiquitination	1.57E-02
74	GO:0031347: regulation of defense response	1.74E-02
75	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.74E-02
76	GO:0009846: pollen germination	1.79E-02
77	GO:0051603: proteolysis involved in cellular protein catabolic process	1.93E-02
78	GO:0042545: cell wall modification	2.37E-02
79	GO:0035556: intracellular signal transduction	2.38E-02
80	GO:0018105: peptidyl-serine phosphorylation	2.47E-02
81	GO:0051726: regulation of cell cycle	2.52E-02
82	GO:0000398: mRNA splicing, via spliceosome	2.68E-02
83	GO:0006633: fatty acid biosynthetic process	3.33E-02
84	GO:0010150: leaf senescence	3.57E-02
85	GO:0045490: pectin catabolic process	3.57E-02
86	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.86E-02
87	GO:0006470: protein dephosphorylation	3.92E-02
88	GO:0042742: defense response to bacterium	4.55E-02

Rank	GO Term	Adjusted P value
1	GO:0004370: glycerol kinase activity	0.00E+00
2	GO:0042030: ATPase inhibitor activity	0.00E+00
3	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
4	GO:0004713: protein tyrosine kinase activity	7.18E-05
5	GO:0005524: ATP binding	9.54E-05
6	GO:0045140: inositol phosphoceramide synthase activity	1.62E-04
7	GO:0019200: carbohydrate kinase activity	1.62E-04
8	GO:0004566: beta-glucuronidase activity	1.62E-04
9	GO:0001664: G-protein coupled receptor binding	2.75E-04
10	GO:0031683: G-protein beta/gamma-subunit complex binding	2.75E-04
11	GO:0004663: Rab geranylgeranyltransferase activity	2.75E-04
12	GO:0047769: arogenate dehydratase activity	5.32E-04
13	GO:0004664: prephenate dehydratase activity	5.32E-04
14	GO:0031386: protein tag	6.73E-04
15	GO:0004356: glutamate-ammonia ligase activity	6.73E-04
16	GO:0047714: galactolipase activity	8.23E-04
17	GO:0102391: decanoate--CoA ligase activity	9.79E-04
18	GO:0004620: phospholipase activity	1.14E-03
19	GO:0004467: long-chain fatty acid-CoA ligase activity	1.14E-03
20	GO:0004143: diacylglycerol kinase activity	1.14E-03
21	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.18E-03
22	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.32E-03
23	GO:0003951: NAD+ kinase activity	1.50E-03
24	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	1.50E-03
25	GO:0004871: signal transducer activity	1.62E-03
26	GO:0047617: acyl-CoA hydrolase activity	1.89E-03
27	GO:0004674: protein serine/threonine kinase activity	1.90E-03
28	GO:0005545: 1-phosphatidylinositol binding	2.10E-03
29	GO:0005217: intracellular ligand-gated ion channel activity	3.23E-03
30	GO:0004970: ionotropic glutamate receptor activity	3.23E-03
31	GO:0030552: cAMP binding	3.23E-03
32	GO:0030553: cGMP binding	3.23E-03
33	GO:0008565: protein transporter activity	3.89E-03
34	GO:0005216: ion channel activity	3.99E-03
35	GO:0043424: protein histidine kinase binding	3.99E-03
36	GO:0005249: voltage-gated potassium channel activity	5.68E-03
37	GO:0030551: cyclic nucleotide binding	5.68E-03
38	GO:0030276: clathrin binding	5.98E-03
39	GO:0004518: nuclease activity	7.24E-03
40	GO:0016301: kinase activity	7.43E-03
41	GO:0016413: O-acetyltransferase activity	8.59E-03
42	GO:0016597: amino acid binding	8.59E-03
43	GO:0009931: calcium-dependent protein serine/threonine kinase activity	9.65E-03
44	GO:0004683: calmodulin-dependent protein kinase activity	1.00E-02
45	GO:0004806: triglyceride lipase activity	1.00E-02
46	GO:0030247: polysaccharide binding	1.00E-02
47	GO:0003924: GTPase activity	1.27E-02
48	GO:0004364: glutathione transferase activity	1.48E-02
49	GO:0004672: protein kinase activity	1.64E-02
50	GO:0045330: aspartyl esterase activity	2.02E-02
51	GO:0030599: pectinesterase activity	2.31E-02
52	GO:0003779: actin binding	2.37E-02
53	GO:0030246: carbohydrate binding	3.04E-02
54	GO:0005516: calmodulin binding	3.39E-02
55	GO:0046910: pectinesterase inhibitor activity	3.39E-02
56	GO:0008017: microtubule binding	3.68E-02
57	GO:0005525: GTP binding	3.71E-02
58	GO:0008194: UDP-glycosyltransferase activity	3.86E-02
59	GO:0042802: identical protein binding	4.23E-02
60	GO:0046982: protein heterodimerization activity	4.80E-02
61	GO:0004601: peroxidase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.11E-07
2	GO:0005911: cell-cell junction	6.74E-05
3	GO:0005795: Golgi stack	1.49E-04
4	GO:0030136: clathrin-coated vesicle	3.27E-04
5	GO:0005968: Rab-protein geranylgeranyltransferase complex	3.98E-04
6	GO:0005765: lysosomal membrane	2.31E-03
7	GO:0005834: heterotrimeric G-protein complex	2.32E-03
8	GO:0016602: CCAAT-binding factor complex	2.76E-03
9	GO:0009524: phragmoplast	3.43E-03
10	GO:0005905: clathrin-coated pit	4.26E-03
11	GO:0071944: cell periphery	7.57E-03
12	GO:0005794: Golgi apparatus	8.54E-03
13	GO:0000932: P-body	8.93E-03
14	GO:0005819: spindle	1.35E-02
15	GO:0005635: nuclear envelope	1.97E-02
16	GO:0005829: cytosol	2.02E-02
17	GO:0009506: plasmodesma	3.66E-02
18	GO:0005622: intracellular	4.00E-02