gene detail

Gene description

TAIR ID: AT5G03150

Short description: C2H2-like zinc finger protein

Pathogen responsiveness: -2.39

General responsiveness: -1.62

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

regulation of transcription, DNA-templated, asymmetric cell division, regulation of meristem growth, regulation of cell division, regulation of epidermal cell differentiation, transcription, root development

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, metal ion binding, DNA binding, protein homodimerization activity, protein binding

Protein domain

Pfam	PF12171, Zinc-finger double-stranded RNA-binding
SMART	SM00355, ZnF_C2H2

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G24050, AT4G34680, AT2G45050, AT2G02820, AT3G60530, AT2G43010, AT4G36990, AT1G14350, AT3G54220, AT4G37650

Target:
AT3G54220

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE13739_EDS16_GO view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.59	5.77E-06