gene detail

Gene description

TAIR ID: AT5G02810

Short description: pseudo-response regulator 7

Pathogen responsiveness: 0.37

General responsiveness: -0.20

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G095727

Wheat: No orthologous gene

GO biological process

circadian rhythm, regulation of transcription, DNA-templated, negative regulation of transcription, phosphorelay signal transduction system, red or far-red light signaling pathway, transcription, response to temperature stimulus

GO cellular component

nucleus, mitochondrion

GO molecular function

phosphorelay response regulator activity

Protein domain

Pfam	PF00072, Response regulator receiver domain
Pfam	PF06203, CCT motif
SMART	SM00448, REC

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04712: Circadian rhythm - plant

Transcriptional regulation

Regulator:
AT2G46830, AT1G01060

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 9 (Top20%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

10 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	-4.29	8.00E-26
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	-4.16	2.95E-25
GSE17464	Laer, control	Laer, PstDC3000 12 h	-3.20	1.61E-15
GSE17464	Penta, control	Penta, PstDC3000 12 h	-2.84	1.25E-13
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	-6.54	1.31E-09
GSE26679	Col, WT, GC 0 h	Col, WT, GC 36 h	-4.78	2.23E-07
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 18 h	-5.66	1.44E-08
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	-3.78	5.28E-06
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-3.39	1.23E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- hrpS- 10 h	-3.42	4.97E-02