gene detail

Gene description

TAIR ID: AT5G02170

Short description: Transmembrane amino acid transporter family protein

Pathogen responsiveness: -0.92

General responsiveness: -1.05

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

amino acid transport

GO cellular component

membrane, plasma membrane, integral component of membrane

GO molecular function

amino acid transmembrane transporter activity

Protein domain

Pfam	PF01490, Transmembrane amino acid transporter protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G09290, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2 view
GSE13739_EDS16_GO view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	2.32	2.62E-10
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-2.45	1.37E-03
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-3.06	5.42E-04
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 EV	3.32	1.91E-04
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.86	2.97E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.39	2.23E-12
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	1.82	4.82E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	1.77	2.31E-05