gene detail

Gene description

TAIR ID: AT5G01920

Short description: Protein kinase superfamily protein

Pathogen responsiveness: 0.17

General responsiveness: 1.65

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat:

TA.1981.3.S1_AT

GO biological process

photosystem II stabilization

GO cellular component

chloroplast, thylakoid

GO molecular function

protein kinase activity, kinase activity

Protein domain

Pfam	PF00069, Protein kinase domain
SMART	SM00220, S_TKc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE13739_EDS16_GO  view
GSE26679_EDR1_GC  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

28 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE11807	Col, mpk6 ko, water 4 h	Col, mpk6 ko, Flg22 4 h	-1.67	3.36E-02
GSE12856	Col, WT, control	Col, WT, Bg h	-1.60	5.72E-07
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-1.86	1.02E-07
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.92	1.59E-03
GSE17464	Laer, control	Laer, PstDC3000 12 h	1.50	9.43E-03
GSE17464	Laer, control	Laer, Flg22 2 h	-1.87	7.10E-04
GSE17464	Penta, control	Penta, Flg22 2 h	-2.17	1.05E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-1.86	4.08E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-3.51	6.68E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.65	2.71E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-1.52	1.22E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.73	1.37E-11
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	-1.93	7.86E-04
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.63	6.28E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.51	1.13E-14
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-2.08	8.63E-10
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-1.53	1.58E-06
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.96	4.95E-10
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.11	2.22E-11
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.53	2.35E-06
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	-1.50	1.21E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-2.02	2.03E-09
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-1.66	1.23E-07
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-1.85	2.66E-08
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	-1.57	2.09E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.25	3.21E-03
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.58	2.53E-08
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	-1.57	1.27E-02