GO Enrichment Analysis of Co-expressed Genes with
AT5G01920
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090470: shoot organ boundary specification | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 4 | GO:0010196: nonphotochemical quenching | 4.52E-05 |
| 5 | GO:0010027: thylakoid membrane organization | 8.01E-05 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.02E-04 |
| 7 | GO:0051180: vitamin transport | 1.02E-04 |
| 8 | GO:0030974: thiamine pyrophosphate transport | 1.02E-04 |
| 9 | GO:0043489: RNA stabilization | 1.02E-04 |
| 10 | GO:0000481: maturation of 5S rRNA | 1.02E-04 |
| 11 | GO:0033481: galacturonate biosynthetic process | 1.02E-04 |
| 12 | GO:0042371: vitamin K biosynthetic process | 1.02E-04 |
| 13 | GO:0043686: co-translational protein modification | 1.02E-04 |
| 14 | GO:0034628: 'de novo' NAD biosynthetic process from aspartate | 1.02E-04 |
| 15 | GO:0034337: RNA folding | 1.02E-04 |
| 16 | GO:0010205: photoinhibition | 1.12E-04 |
| 17 | GO:0009773: photosynthetic electron transport in photosystem I | 1.56E-04 |
| 18 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.82E-04 |
| 19 | GO:0010207: photosystem II assembly | 2.37E-04 |
| 20 | GO:0015893: drug transport | 2.40E-04 |
| 21 | GO:0034755: iron ion transmembrane transport | 2.40E-04 |
| 22 | GO:0010115: regulation of abscisic acid biosynthetic process | 2.40E-04 |
| 23 | GO:0001736: establishment of planar polarity | 2.40E-04 |
| 24 | GO:0010024: phytochromobilin biosynthetic process | 2.40E-04 |
| 25 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.99E-04 |
| 26 | GO:0006788: heme oxidation | 3.99E-04 |
| 27 | GO:0090391: granum assembly | 3.99E-04 |
| 28 | GO:0006518: peptide metabolic process | 3.99E-04 |
| 29 | GO:0051176: positive regulation of sulfur metabolic process | 3.99E-04 |
| 30 | GO:0080170: hydrogen peroxide transmembrane transport | 5.73E-04 |
| 31 | GO:0010371: regulation of gibberellin biosynthetic process | 5.73E-04 |
| 32 | GO:0071484: cellular response to light intensity | 5.73E-04 |
| 33 | GO:0030104: water homeostasis | 7.62E-04 |
| 34 | GO:0010021: amylopectin biosynthetic process | 7.62E-04 |
| 35 | GO:0045727: positive regulation of translation | 7.62E-04 |
| 36 | GO:0016120: carotene biosynthetic process | 9.62E-04 |
| 37 | GO:0006564: L-serine biosynthetic process | 9.62E-04 |
| 38 | GO:0031365: N-terminal protein amino acid modification | 9.62E-04 |
| 39 | GO:0006461: protein complex assembly | 9.62E-04 |
| 40 | GO:0009435: NAD biosynthetic process | 9.62E-04 |
| 41 | GO:0030308: negative regulation of cell growth | 9.62E-04 |
| 42 | GO:0009913: epidermal cell differentiation | 1.17E-03 |
| 43 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.17E-03 |
| 44 | GO:0006561: proline biosynthetic process | 1.17E-03 |
| 45 | GO:0006751: glutathione catabolic process | 1.17E-03 |
| 46 | GO:0000470: maturation of LSU-rRNA | 1.17E-03 |
| 47 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.40E-03 |
| 48 | GO:0009735: response to cytokinin | 1.47E-03 |
| 49 | GO:0050829: defense response to Gram-negative bacterium | 1.65E-03 |
| 50 | GO:1900057: positive regulation of leaf senescence | 1.65E-03 |
| 51 | GO:0010444: guard mother cell differentiation | 1.65E-03 |
| 52 | GO:0006400: tRNA modification | 1.65E-03 |
| 53 | GO:0009658: chloroplast organization | 1.88E-03 |
| 54 | GO:0008610: lipid biosynthetic process | 1.90E-03 |
| 55 | GO:0005978: glycogen biosynthetic process | 1.90E-03 |
| 56 | GO:0030091: protein repair | 1.90E-03 |
| 57 | GO:0032508: DNA duplex unwinding | 1.90E-03 |
| 58 | GO:0006839: mitochondrial transport | 2.11E-03 |
| 59 | GO:0009657: plastid organization | 2.17E-03 |
| 60 | GO:0032544: plastid translation | 2.17E-03 |
| 61 | GO:0006810: transport | 2.21E-03 |
| 62 | GO:0010206: photosystem II repair | 2.45E-03 |
| 63 | GO:0009060: aerobic respiration | 2.45E-03 |
| 64 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.45E-03 |
| 65 | GO:0005982: starch metabolic process | 2.74E-03 |
| 66 | GO:0015979: photosynthesis | 2.92E-03 |
| 67 | GO:0009688: abscisic acid biosynthetic process | 3.05E-03 |
| 68 | GO:0048829: root cap development | 3.05E-03 |
| 69 | GO:0006364: rRNA processing | 3.19E-03 |
| 70 | GO:0008285: negative regulation of cell proliferation | 3.36E-03 |
| 71 | GO:0009073: aromatic amino acid family biosynthetic process | 3.36E-03 |
| 72 | GO:0006879: cellular iron ion homeostasis | 3.36E-03 |
| 73 | GO:0009750: response to fructose | 3.36E-03 |
| 74 | GO:0048765: root hair cell differentiation | 3.36E-03 |
| 75 | GO:0000038: very long-chain fatty acid metabolic process | 3.36E-03 |
| 76 | GO:0010628: positive regulation of gene expression | 4.02E-03 |
| 77 | GO:0006006: glucose metabolic process | 4.02E-03 |
| 78 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.02E-03 |
| 79 | GO:0010143: cutin biosynthetic process | 4.37E-03 |
| 80 | GO:0009225: nucleotide-sugar metabolic process | 4.72E-03 |
| 81 | GO:0006487: protein N-linked glycosylation | 5.46E-03 |
| 82 | GO:0010073: meristem maintenance | 5.85E-03 |
| 83 | GO:0031408: oxylipin biosynthetic process | 6.24E-03 |
| 84 | GO:0003333: amino acid transmembrane transport | 6.24E-03 |
| 85 | GO:0035428: hexose transmembrane transport | 6.64E-03 |
| 86 | GO:0016226: iron-sulfur cluster assembly | 6.64E-03 |
| 87 | GO:0071369: cellular response to ethylene stimulus | 7.06E-03 |
| 88 | GO:0010227: floral organ abscission | 7.06E-03 |
| 89 | GO:0006633: fatty acid biosynthetic process | 7.10E-03 |
| 90 | GO:0042127: regulation of cell proliferation | 7.48E-03 |
| 91 | GO:0009306: protein secretion | 7.48E-03 |
| 92 | GO:0016117: carotenoid biosynthetic process | 7.91E-03 |
| 93 | GO:0042335: cuticle development | 8.35E-03 |
| 94 | GO:0034220: ion transmembrane transport | 8.35E-03 |
| 95 | GO:0009416: response to light stimulus | 8.38E-03 |
| 96 | GO:0009958: positive gravitropism | 8.80E-03 |
| 97 | GO:0010182: sugar mediated signaling pathway | 8.80E-03 |
| 98 | GO:0046323: glucose import | 8.80E-03 |
| 99 | GO:0019252: starch biosynthetic process | 9.73E-03 |
| 100 | GO:0045893: positive regulation of transcription, DNA-templated | 9.99E-03 |
| 101 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.02E-02 |
| 102 | GO:0071554: cell wall organization or biogenesis | 1.02E-02 |
| 103 | GO:0016032: viral process | 1.07E-02 |
| 104 | GO:0042254: ribosome biogenesis | 1.23E-02 |
| 105 | GO:0048573: photoperiodism, flowering | 1.48E-02 |
| 106 | GO:0016311: dephosphorylation | 1.54E-02 |
| 107 | GO:0010311: lateral root formation | 1.65E-02 |
| 108 | GO:0000160: phosphorelay signal transduction system | 1.65E-02 |
| 109 | GO:0009631: cold acclimation | 1.77E-02 |
| 110 | GO:0006865: amino acid transport | 1.83E-02 |
| 111 | GO:0045087: innate immune response | 1.89E-02 |
| 112 | GO:0009637: response to blue light | 1.89E-02 |
| 113 | GO:0032259: methylation | 2.13E-02 |
| 114 | GO:0009640: photomorphogenesis | 2.26E-02 |
| 115 | GO:0009926: auxin polar transport | 2.26E-02 |
| 116 | GO:0006855: drug transmembrane transport | 2.52E-02 |
| 117 | GO:0009736: cytokinin-activated signaling pathway | 2.80E-02 |
| 118 | GO:0009409: response to cold | 2.99E-02 |
| 119 | GO:0009734: auxin-activated signaling pathway | 3.13E-02 |
| 120 | GO:0048316: seed development | 3.22E-02 |
| 121 | GO:0009624: response to nematode | 3.59E-02 |
| 122 | GO:0006396: RNA processing | 3.67E-02 |
| 123 | GO:0051726: regulation of cell cycle | 3.75E-02 |
| 124 | GO:0009742: brassinosteroid mediated signaling pathway | 3.75E-02 |
| 125 | GO:0055114: oxidation-reduction process | 3.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008987: quinolinate synthetase A activity | 0.00E+00 |
| 2 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 6 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 7 | GO:0042586: peptide deformylase activity | 1.02E-04 |
| 8 | GO:0045485: omega-6 fatty acid desaturase activity | 1.02E-04 |
| 9 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.02E-04 |
| 10 | GO:0090422: thiamine pyrophosphate transporter activity | 1.02E-04 |
| 11 | GO:0008266: poly(U) RNA binding | 2.37E-04 |
| 12 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 2.40E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.40E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.40E-04 |
| 15 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 2.40E-04 |
| 16 | GO:0005528: FK506 binding | 3.32E-04 |
| 17 | GO:0043169: cation binding | 3.99E-04 |
| 18 | GO:0016851: magnesium chelatase activity | 5.73E-04 |
| 19 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 5.73E-04 |
| 20 | GO:0001872: (1->3)-beta-D-glucan binding | 5.73E-04 |
| 21 | GO:0016746: transferase activity, transferring acyl groups | 5.75E-04 |
| 22 | GO:0019843: rRNA binding | 7.34E-04 |
| 23 | GO:0010328: auxin influx transmembrane transporter activity | 7.62E-04 |
| 24 | GO:0050378: UDP-glucuronate 4-epimerase activity | 7.62E-04 |
| 25 | GO:0004392: heme oxygenase (decyclizing) activity | 7.62E-04 |
| 26 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.62E-04 |
| 27 | GO:0010011: auxin binding | 7.62E-04 |
| 28 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 7.62E-04 |
| 29 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.17E-03 |
| 30 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.17E-03 |
| 31 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.40E-03 |
| 32 | GO:0016491: oxidoreductase activity | 1.82E-03 |
| 33 | GO:0043022: ribosome binding | 1.90E-03 |
| 34 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.11E-03 |
| 35 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.17E-03 |
| 36 | GO:0005381: iron ion transmembrane transporter activity | 2.74E-03 |
| 37 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.77E-03 |
| 38 | GO:0008047: enzyme activator activity | 3.05E-03 |
| 39 | GO:0004565: beta-galactosidase activity | 4.02E-03 |
| 40 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.02E-03 |
| 41 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 5.09E-03 |
| 42 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 5.09E-03 |
| 43 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 5.09E-03 |
| 44 | GO:0005215: transporter activity | 5.72E-03 |
| 45 | GO:0005355: glucose transmembrane transporter activity | 9.26E-03 |
| 46 | GO:0050662: coenzyme binding | 9.26E-03 |
| 47 | GO:0000156: phosphorelay response regulator activity | 1.12E-02 |
| 48 | GO:0016791: phosphatase activity | 1.17E-02 |
| 49 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.19E-02 |
| 50 | GO:0016597: amino acid binding | 1.27E-02 |
| 51 | GO:0016413: O-acetyltransferase activity | 1.27E-02 |
| 52 | GO:0015250: water channel activity | 1.32E-02 |
| 53 | GO:0008375: acetylglucosaminyltransferase activity | 1.43E-02 |
| 54 | GO:0030247: polysaccharide binding | 1.48E-02 |
| 55 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.60E-02 |
| 56 | GO:0015238: drug transmembrane transporter activity | 1.65E-02 |
| 57 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.71E-02 |
| 58 | GO:0004222: metalloendopeptidase activity | 1.71E-02 |
| 59 | GO:0003746: translation elongation factor activity | 1.89E-02 |
| 60 | GO:0003993: acid phosphatase activity | 1.95E-02 |
| 61 | GO:0050661: NADP binding | 2.07E-02 |
| 62 | GO:0003824: catalytic activity | 2.30E-02 |
| 63 | GO:0015293: symporter activity | 2.46E-02 |
| 64 | GO:0051287: NAD binding | 2.59E-02 |
| 65 | GO:0015171: amino acid transmembrane transporter activity | 3.01E-02 |
| 66 | GO:0003729: mRNA binding | 3.37E-02 |
| 67 | GO:0022857: transmembrane transporter activity | 3.44E-02 |
| 68 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.30E-02 |
| 69 | GO:0016740: transferase activity | 4.78E-02 |
| 70 | GO:0015144: carbohydrate transmembrane transporter activity | 4.79E-02 |
| 71 | GO:0003735: structural constituent of ribosome | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.39E-18 |
| 2 | GO:0009941: chloroplast envelope | 5.69E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.00E-09 |
| 4 | GO:0009579: thylakoid | 3.67E-08 |
| 5 | GO:0009534: chloroplast thylakoid | 3.84E-08 |
| 6 | GO:0009570: chloroplast stroma | 4.42E-08 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.54E-07 |
| 8 | GO:0031977: thylakoid lumen | 3.29E-07 |
| 9 | GO:0031969: chloroplast membrane | 4.42E-05 |
| 10 | GO:0043674: columella | 1.02E-04 |
| 11 | GO:0009515: granal stacked thylakoid | 1.02E-04 |
| 12 | GO:0030095: chloroplast photosystem II | 2.37E-04 |
| 13 | GO:0010007: magnesium chelatase complex | 3.99E-04 |
| 14 | GO:0042807: central vacuole | 1.65E-03 |
| 15 | GO:0009986: cell surface | 1.65E-03 |
| 16 | GO:0009533: chloroplast stromal thylakoid | 1.65E-03 |
| 17 | GO:0009501: amyloplast | 1.90E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.45E-03 |
| 19 | GO:0008180: COP9 signalosome | 2.45E-03 |
| 20 | GO:0055028: cortical microtubule | 3.05E-03 |
| 21 | GO:0032040: small-subunit processome | 3.69E-03 |
| 22 | GO:0000312: plastid small ribosomal subunit | 4.37E-03 |
| 23 | GO:0042651: thylakoid membrane | 5.85E-03 |
| 24 | GO:0016020: membrane | 6.54E-03 |
| 25 | GO:0009523: photosystem II | 9.73E-03 |
| 26 | GO:0032580: Golgi cisterna membrane | 1.17E-02 |
| 27 | GO:0030529: intracellular ribonucleoprotein complex | 1.32E-02 |
| 28 | GO:0016021: integral component of membrane | 1.42E-02 |
| 29 | GO:0019005: SCF ubiquitin ligase complex | 1.60E-02 |
| 30 | GO:0005743: mitochondrial inner membrane | 2.07E-02 |
| 31 | GO:0005840: ribosome | 2.17E-02 |
| 32 | GO:0005886: plasma membrane | 2.69E-02 |
| 33 | GO:0000502: proteasome complex | 2.80E-02 |
| 34 | GO:0009706: chloroplast inner membrane | 3.59E-02 |
| 35 | GO:0010287: plastoglobule | 4.06E-02 |
| 36 | GO:0005777: peroxisome | 4.51E-02 |