Gene: AT4G40060
     

Gene description


TAIR ID: AT4G40060

Short description: homeobox protein 16

Pathogen responsiveness: -0.54

General responsiveness: -0.70

Orthologous


Rice: No orthologous gene
Maize:

GRMZM2G056600  

Wheat: No orthologous gene

GO biological process


negative regulation of cell growth, regulation of transcription, DNA-templated, positive regulation of transcription, photoperiodism, flowering, regulation of timing of transition from vegetative to reproductive phase, response to blue light, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding


Protein domain


PfamPF00046, Homeobox domain
PfamPF02183, Homeobox associated leucine zipper
SMARTSM00389, HOX

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 2

click to view PPI network

Differentially expressed condition


15 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h-1.599.54E-07
GSE17464Laer, controlLaer, Alternaria brassicicola 3 d1.858.87E-07
GSE17464Laer, controlLaer, PstDC3000 12 h2.609.37E-11
GSE17464Penta, controlPenta, Alternaria brassicicola 3 d2.094.17E-08
GSE17464Penta, controlPenta, PstDC3000 12 h2.702.03E-11
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-1.901.21E-06
GSE26679Col, edr1, GC 0 hCol, edr1, GC 36 h1.542.14E-08
GSE37255Ws-4, WT, controlWs-4, WT, Hyaloperonospora arabidopsidis strain Emwa1 3 d1.601.27E-02
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-1.948.20E-03
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-1.654.33E-02
GSE37269St0, WT, controlSt0, WT, TEV 21 d-2.151.93E-03
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.561.10E-10
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-1.733.57E-15
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h-1.751.53E-03
GSE73351Ws-4, WT, controlWs-4, WT, H.ara Emwa1 3 d1.609.51E-04






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