gene detail

Gene description

TAIR ID: AT4G39400

Short description: Leucine-rich receptor-like protein kinase family protein

Pathogen responsiveness: -1.11

General responsiveness: -1.48

Orthologous

Rice:

OS01G0718300

Maize:

GRMZM2G048294

Wheat:

TAAFFX.50927.1.S1_AT

GO biological process

brassinosteroid mediated signaling pathway, leaf development, detection of brassinosteroid stimulus, negative regulation of cell death, regulation of seedling development, positive regulation of flower development, anther wall tapetum cell differentiation, pollen exine formation, unidimensional cell growth, response to UV-B, brassinosteroid homeostasis

GO cellular component

integral component of membrane, plasma membrane, endosome membrane, endosome

GO molecular function

protein binding, protein serine/threonine kinase activity, protein kinase activity, identical protein binding, protein heterodimerization activity, protein homodimerization activity, kinase activity

Protein domain

Pfam	PF00560, Leucine Rich Repeat
Pfam	PF00069, Protein kinase domain
Pfam	PF12799, Leucine Rich repeats (2 copies)
Pfam	PF13855, Leucine rich repeat
Pfam	PF08263, Leucine rich repeat N-terminal domain
SMART	SM00220, S_TKc
SMART	SM00369, LRR_TYP

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04075: Plant hormone signal transduction

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850, AT4G27330

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 27 (Top10%)

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE5686_WT_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view
GSE26679_EDR1_GC  view

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	-1.54	1.60E-03
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-2.13	3.52E-07
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	-1.86	1.50E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	-1.53	6.69E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	-2.10	3.32E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-2.04	4.90E-11
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-1.84	1.62E-10
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-2.55	1.02E-03