gene detail

Gene description

TAIR ID: AT4G39330

Short description: cinnamyl alcohol dehydrogenase 9

Pathogen responsiveness: 0.88

General responsiveness: 1.94

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

lignin biosynthetic process, response to cytokinin, oxidation-reduction process

GO cellular component

apoplast, cytoplasm

GO molecular function

zinc ion binding, sinapyl alcohol dehydrogenase activity, cinnamyl-alcohol dehydrogenase activity

Protein domain

Pfam	PF08240, Alcohol dehydrogenase GroES-like domain
Pfam	PF00107, Zinc-binding dehydrogenase
SMART	SM00829, PKS_ER

Metabolic pathway

PWY-361: phenylpropanoid biosynthesis

KEGG pathway

PATH:ath00940: Phenylpropanoid biosynthesis

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

34 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, WT, control	Col, WT, Bg h	-1.72	1.69E-04
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	-2.06	2.70E-05
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 5 d	-1.59	7.78E-04
GSE13739	Col, WT, control 7 d	Col, WT, G.orontii 7 d	-2.39	2.50E-07
GSE13739	Col, eds, control 7 d	Col, eds, G.orontii 7 d	-1.71	1.71E-04
GSE17464	Laer, control	Laer, Alternaria brassicicola 3 d	1.64	4.04E-03
GSE17464	Penta, control	Penta, Alternaria brassicicola 3 d	1.53	7.08E-03
GSE17464	Penta, control	Penta, PstDC3000 12 h	1.79	1.35E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	-2.72	5.72E-04
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	-2.90	2.27E-04
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	-2.67	5.93E-04
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	-6.13	1.60E-11
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.57	1.63E-02
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	-3.69	4.28E-05
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	-2.01	7.67E-03
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	-3.70	4.43E-05
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-2.44	5.40E-13
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	-2.70	5.60E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-2.78	5.70E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-2.73	4.46E-04
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	-2.91	1.86E-08
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	-2.35	1.43E-05
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	-2.15	3.14E-05
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	-2.14	6.49E-05
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-2.51	1.27E-06
GSE56094	Col, WT, control 12 h	Col, WT, hrpA- 12 h	-1.94	5.87E-04
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	-2.91	2.00E-08
GSE56094	Col, WT, control 13 h	Col, WT, hrpA- 13 h	-1.88	8.39E-04
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	-2.51	3.73E-06
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	-2.90	5.40E-08
GSE56094	Col, WT, control 9 h	Col, WT, hrpA- 9 h	-3.31	6.26E-09
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	-1.79	4.12E-02
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	-2.40	5.41E-05
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	-2.12	1.53E-03