gene detail

Gene description

TAIR ID: AT4G37850

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: -1.36

General responsiveness: -2.82

Orthologous

Rice:

OS03G0725800

Maize: No orthologous gene

Wheat:

TA.10526.1.A1_S_AT TA.10526.1.A1_X_AT TAAFFX.16336.2.S1_AT TAAFFX.92073.1.S1_AT

GO biological process

regulation of transcription, DNA-templated, transcription

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, protein dimerization activity, DNA binding

Protein domain

Pfam	PF00010, Helix-loop-helix DNA-binding domain
SMART	SM00353, HLH

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT2G43010

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE56094_WT_PSTDC3000 view

Differentially expressed condition

5 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE2169	Col, WT, water	Col, WT, chitin 30 min	-1.56	1.24E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.74	1.23E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	4.34	1.51E-09
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	3.95	1.28E-10
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	1.54	1.97E-11