gene detail

Gene description

TAIR ID: AT4G37010

Short description: centrin 2

Pathogen responsiveness: 1.21

General responsiveness: 2.45

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

DNA repair

GO cellular component

cytoplasm, plasma membrane, nucleus

GO molecular function

calcium ion binding

Protein domain

Pfam	PF13499, EF-hand domain pair
SMART	SM00054, EFh

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT2G20180

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 5

Coexpression network

Differentially expressed condition

31 conditions

Show entries

Search:

Series	Control	Treatment	Log₂FC	Adj. P value
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	5.14	1.71E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	4.96	4.79E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	4.77	8.95E-14
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	4.68	9.93E-14
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	4.38	4.48E-08
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	4.36	4.19E-13
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	4.25	8.34E-08
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	4.16	5.25E-08
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	4.09	1.57E-13
GSE40544	Col, Sid2, control	Col, Sid2, PstDC3000 AvrRpt2	3.95	1.58E-07

Showing 1 to 10 of 31 entries