gene detail

Gene description

TAIR ID: AT4G36410

Short description: ubiquitin-conjugating enzyme 17

Pathogen responsiveness: -0.54

General responsiveness: -1.16

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

protein polyubiquitination, ubiquitin-dependent protein catabolic process, response to gibberellin, proteasome-mediated ubiquitin-dependent protein catabolic process

GO cellular component

nucleus, cytoplasm

GO molecular function

ATP binding, ubiquitin-protein transferase activity, ubiquitin protein ligase activity, ubiquitin protein ligase binding

Protein domain

Pfam	PF00179, Ubiquitin-conjugating enzyme
SMART	SM00212, UBCc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04120: Ubiquitin mediated proteolysis

Transcriptional regulation

Regulator:
AT1G13450, AT1G73805, AT5G26920, AT1G24260, AT2G47190

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network

GSE26679_WT_GC view

Differentially expressed condition

12 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, JA+Flg22 0 h	Laer, JA+Flg22 2 h	1.88	4.63E-02
GSE26679	Col, WT, GC 0 h	Col, WT, GC 18 h	1.59	1.70E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	2.00	2.23E-08
GSE37269	Di2, WT, control	Di2, WT, TEV 21 d	-3.06	1.26E-05
GSE37269	Ei2, WT, control	Ei2, WT, TEV 21 d	-1.90	3.56E-03
GSE37269	Ler0, WT, control	Ler0, WT, TEV 21 d	-2.69	1.91E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-3.06	1.30E-06
GSE37269	Wt1, WT, control	Wt1, WT, TEV 21 d	-2.50	4.04E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	2.11	2.16E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.88	6.39E-05
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	-1.62	2.76E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.56	6.30E-04