Gene: AT4G34830
     

Gene description


TAIR ID: AT4G34830

Short description: Pentatricopeptide repeat (PPR) superfamily protein

Pathogen responsiveness: 0.01

General responsiveness: 1.73

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


mRNA stabilization, RNA modification


GO cellular component


chloroplast


GO molecular function


RNA binding, endonuclease activity


Protein domain


PfamPF17177, Pentacotripeptide-repeat region of PROPR
PfamPF01535, PPR repeat
PfamPF12854, PPR repeat
PfamPF13041, PPR repeat family

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT4G36990

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h-1.871.12E-03
GSE17464Penta, controlPenta, Flg22 2 h-1.912.09E-04
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h-2.916.81E-08
GSE40544Col, WT, controlCol, WT, PstDC3000 EV-1.655.27E-05
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h-2.451.90E-15
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h-1.681.33E-12
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 8 h-2.042.62E-14
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 12 h-1.751.42E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h-1.597.07E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h-1.962.67E-14
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h-2.571.92E-13
GSE5520Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.933.24E-04
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h-2.516.47E-17
GSE56094Col, WT, control 10 hCol, WT, hrpA- 10 h-1.512.51E-07
GSE56094Col, WT, control 11 hCol, WT, PstDC3000 11 h-2.115.82E-13
GSE56094Col, WT, control 11 hCol, WT, hrpA- 11 h-1.541.25E-07
GSE56094Col, WT, control 12 hCol, WT, PstDC3000 12 h-2.134.77E-13
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h-2.095.04E-13
GSE56094Col, WT, control 7 hCol, WT, PstDC3000 7 h-1.596.64E-08
GSE56094Col, WT, control 7 hCol, WT, hrpA- 7 h-1.572.37E-07
GSE56094Col, WT, control 8 hCol, WT, PstDC3000 8 h-1.683.46E-09
GSE56094Col, WT, control 8 hCol, WT, hrpA- 8 h-1.531.82E-07
GSE56094Col, WT, control 9 hCol, WT, PstDC3000 9 h-1.657.18E-09






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