gene detail

Gene description

TAIR ID: AT4G34030

Short description: 3-methylcrotonyl-CoA carboxylase

Pathogen responsiveness: -0.91

General responsiveness: -2.06

Orthologous

Rice: No orthologous gene

Maize:

Wheat: No orthologous gene

GO biological process

leucine catabolic process

GO cellular component

mitochondrial matrix, mitochondrion

GO molecular function

methylcrotonoyl-CoA carboxylase activity, biotin carboxylase activity, ATP binding

Protein domain

Pfam	PF01039, Carboxyl transferase domain

Metabolic pathway

LEU-DEG2-PWY: leucine degradation I

KEGG pathway

PATH:ath00280: Valine, leucine and isoleucine degradation

Transcriptional regulation

Regulator:
AT5G56110, AT4G36990, AT4G31800

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 2

Coexpression network

Differentially expressed condition

8 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Laer, control	Laer, Flg22 2 h	-1.53	9.00E-03
GSE17464	Penta, control	Penta, Flg22 2 h	-1.81	1.94E-03
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.84	3.34E-08
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	-1.54	4.15E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	-2.34	7.44E-13
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	-1.65	4.48E-12
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.85	3.74E-03
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	-1.87	8.67E-04