gene detail

Gene description

TAIR ID: AT4G33920

Short description: Protein phosphatase 2C family protein

Pathogen responsiveness: 0.42

General responsiveness: -0.19

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G050512

Wheat: No orthologous gene

GO biological process

protein dephosphorylation

GO cellular component

unkown

GO molecular function

protein serine/threonine phosphatase activity, metal ion binding

Protein domain

Pfam	PF00481, Protein phosphatase 2C
SMART	SM00332, PP2Cc

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT3G14230, AT5G11260, AT4G36990

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 7

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

31 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE12856	Col, ataf1, control	Col, ataf1, Bg h	1.88	4.30E-05
GSE17464	Laer, control	Laer, Flg22 1 h	2.93	1.25E-07
GSE17464	Laer, control	Laer, Flg22 2 h	2.02	1.29E-04
GSE17464	Penta, control	Penta, Flg22 2 h	2.68	6.99E-07
GSE17464	Penta, control	Penta, Flg22 2 h	2.15	4.88E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	1.68	7.04E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	1.61	1.74E-05
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	2.67	1.78E-05
GSE21920	Col, WT, mock	Col, WT, Pto HopZ1a 6 h	1.70	1.33E-06
GSE2538	Col, WT, control	Col, WT, crab shell chitin 30 min	1.70	6.69E-03
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	1.99	2.55E-03
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	1.57	5.84E-09
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	1.65	3.39E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.57	6.36E-09
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	1.92	3.69E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	1.96	2.21E-10
GSE45214	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	1.78	2.48E-10
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	1.77	1.20E-10
GSE4746	Col, WT, water 30 min	Col, WT, chitooctaose 30 min	1.55	4.28E-02
GSE5520	Col, WT, control 10 h	Col, WT, Cor- 10 h	1.82	9.68E-03
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	1.68	3.68E-07
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	1.95	6.46E-09
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.61	8.27E-06
GSE56094	Col, WT, control 8 h	Col, WT, hrpA- 8 h	1.50	1.56E-05
GSE5615	Col, WT, GST 4 h	Col, WT, GST+NPP1 4 h	1.64	2.91E-03
GSE5615	Col, WT, water 4 h	Col, WT, HrpZ 4 h	2.51	5.80E-06
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	2.79	1.14E-02
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 2-4 h	1.91	4.32E-03
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.93	8.14E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 2-4 h	1.53	1.85E-02
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	2.14	5.31E-03