gene detail

Gene description

TAIR ID: AT4G32940

Short description: gamma vacuolar processing enzyme

Pathogen responsiveness: -0.82

General responsiveness: -0.66

Orthologous

Rice:

OS01G0559600

Maize:

GRMZM2G081626

Wheat: No orthologous gene

GO biological process

proteolysis involved in cellular protein catabolic process, proteolysis, vacuolar protein processing, response to salicylic acid, leaf senescence, response to jasmonic acid, response to ethylene, response to wounding

GO cellular component

vacuole, lytic vacuole, extracellular region

GO molecular function

cysteine-type endopeptidase activity, endopeptidase activity

Protein domain

Pfam	PF01650, Peptidase C13 family

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT5G13790, AT1G73805, AT5G26920, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 1

click to view PPI network

Coexpression network

GSE26679_WT_GC  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE5686_WT_GO  view
GSE56094_WT_PSTDC3000  view
GSE26679_EDR1_GC  view

Differentially expressed condition

7 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-1.98	8.26E-06
GSE26679	Col, edr1, GC 0 h	Col, edr1, GC 36 h	1.58	3.23E-09
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.94	3.68E-04
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	1.83	1.48E-03
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	-1.81	4.48E-08
GSE6556	Col, gh3.5, control	Col, gh3.5, PstDC3000 AvrRpt2 48 h	1.99	4.23E-06
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 90-105 min	-1.57	6.26E-03