Gene: AT4G29930
     

Gene description


TAIR ID: AT4G29930

Short description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Pathogen responsiveness: NA

General responsiveness: NA

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


regulation of transcription, DNA-templated, transcription


GO cellular component


nucleus


GO molecular function


transcription factor activity, sequence-specific DNA binding, DNA binding, protein dimerization activity


Protein domain


PfamPF00010, Helix-loop-helix DNA-binding domain
SMARTSM00353, HLH

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT5G13790, AT1G24260

Target:
none

Protein-protein interaction network


The number of partners (degree) is: 13 (Top20%)

click to view PPI network

Coexpression network


No coexpression gene


Differentially expressed condition


5 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE37269Di2, WT, controlDi2, WT, TEV 21 d-3.441.99E-05
GSE37269Ei2, WT, controlEi2, WT, TEV 21 d-2.576.40E-04
GSE37269Ler0, WT, controlLer0, WT, TEV 21 d-3.393.23E-06
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-3.521.14E-05
GSE45214Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h1.791.12E-10






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