Gene: AT4G28550
     


Gene description


TAIR ID: AT4G28550

Short description: Ypt/Rab-GAP domain of gyp1p superfamily protein

Pathogen responsiveness: 0.11

General responsiveness: -1.88

Orthologous


Rice: No orthologous gene
Maize: No orthologous gene
Wheat: No orthologous gene

GO biological process


unkown


GO cellular component


cytoplasm


GO molecular function


unkown


Protein domain


PfamPF00566, Rab-GTPase-TBC domain
SMARTSM00164, TBC

Metabolic pathway


Not involved in metabolic pathway


KEGG pathway


Not involved in KEGG pathway


Transcriptional regulation


Regulator:
AT3G27920, AT5G61850

Target:
none

Protein-protein interaction network


No Interactor


Differentially expressed condition


23 conditions



SeriesControlTreatmentLog2FCAdj. P value
GSE12856Col, WT, controlCol, WT, Bg h2.257.99E-08
GSE12856Col, ataf1, controlCol, ataf1, Bg h1.882.71E-07
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 1 h2.161.03E-03
GSE17464Laer, JA+Flg22 0 hLaer, JA+Flg22 2 h1.571.12E-02
GSE17464Laer, controlLaer, Flg22 1 h3.074.28E-07
GSE17464Laer, controlLaer, Flg22 2 h1.702.88E-03
GSE17464Penta, controlPenta, Flg22 2 h2.657.68E-06
GSE17464Penta, controlPenta, Flg22 2 h1.624.59E-03
GSE18978Col, WT, control 24 hCol, WT, PsmES4326 24 h1.526.03E-06
GSE21920Col, WT, mockCol, WT, Pto HopZ1a 6 h1.901.22E-05
GSE37269St0, WT, controlSt0, WT, TEV 21 d-1.705.18E-03
GSE37269Wt1, WT, controlWt1, WT, TEV 21 d-1.821.23E-02
GSE45212Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 12 h1.651.90E-11
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 4 h2.322.01E-13
GSE45212Col, med14, PstDC3000 AvrRpt2 0 hCol, med14, PstDC3000 AvrRpt2 8 h1.651.69E-11
GSE45214Col, WT, PstDC3000 AvrRpt2 0 hCol, WT, PstDC3000 AvrRpt2 4 h1.827.34E-12
GSE45214Col, med16, PstDC3000 AvrRpt2 0 hCol, med16, PstDC3000 AvrRpt2 4 h2.006.66E-13
GSE56094Col, WT, control 10 hCol, WT, PstDC3000 10 h1.531.23E-06
GSE56094Col, WT, control 13 hCol, WT, PstDC3000 13 h1.613.75E-07
GSE5615Col, WT, water 1 hCol, WT, Flg22 1 h1.741.64E-07
GSE5615Col, WT, water 1 hCol, WT, HrpZ 1 h1.883.38E-08
GSE5616Col, WT, water 6 hCol, WT, P. infestans 6 h1.672.97E-06
GSE58954Col, WT, Psm AvrRpt2 0 hCol, WT, Psm AvrRpt2 6 h2.796.34E-04






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