gene detail

Gene description

TAIR ID: AT4G27420

Short description: ABC-2 type transporter family protein

Pathogen responsiveness: -1.51

General responsiveness: -4.97

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

stem vascular tissue pattern formation, cotyledon vascular tissue pattern formation

GO cellular component

integral component of membrane, plasma membrane

GO molecular function

ATPase activity, coupled to transmembrane movement of substances, stem vascular tissue pattern formation, ATP binding, protein homodimerization activity

Protein domain

Pfam	PF00005, ABC transporter
Pfam	PF01061, ABC-2 type transporter
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G13450, AT1G24260

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

No coexpression gene

Differentially expressed condition

2 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.84	3.42E-02
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	5.26	1.94E-02