gene detail

Gene description

TAIR ID: AT4G27410

Short description: NAC (No Apical Meristem) domain transcriptional regulator superfamily protein

Pathogen responsiveness: 1.03

General responsiveness: 1.28

Orthologous

Rice: No orthologous gene

Maize: No orthologous gene

Wheat: No orthologous gene

GO biological process

multicellular organism development, response to water deprivation, regulation of transcription, DNA-templated, positive regulation of transcription, transcription, response to abscisic acid

GO cellular component

nucleus

GO molecular function

transcription factor activity, sequence-specific DNA binding, DNA binding

Protein domain

Pfam	PF02365, No apical meristem (NAM) protein

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT4G25480, AT4G25490, AT5G13790, AT5G11260, AT5G61850, AT4G25470

Target:
AT2G33380, AT3G43720, AT5G62760, AT4G19120, AT5G51070, AT1G71190, AT2G05040, AT4G18210, AT2G45760, AT1G16130, AT4G18220, AT3G09550, AT5G15360, AT5G31536, AT1G02850, AT1G02070, AT3G06420, AT1G26720

Protein-protein interaction network

The number of partners (degree) is: 8

click to view PPI network

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

34 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE13739	Col, WT, control 0 h	Col, WT, G.orontii 6 h	2.23	1.86E-03
GSE13739	Col, eds, control 0 h	Col, eds, G.orontii 6 h	1.99	6.04E-03
GSE17500	Col, 35S:AFB1, control 0 h	Col, 35S:AFB1, PstDC3000 24 h	2.19	1.51E-05
GSE17500	Col, WT, control 0 h	Col, WT, PstDC3000 24 h	2.63	1.58E-06
GSE17500	Col, miR393, control 0 h	Col, miR393, PstDC3000 24 h	2.73	2.65E-06
GSE18978	Col, WT, control 24 h	Col, WT, PsmES4326 24 h	4.55	8.18E-10
GSE37269	Oy0, WT, control	Oy0, WT, TEV 21 d	-2.63	6.09E-03
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.65	8.48E-03
GSE40544	Col, WT, control	Col, WT, PstDC3000 AvrRpt2	1.52	8.04E-04
GSE40544	Col, WT, control	Col, WT, PstDC3000 EV	1.69	2.81E-04
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 12 h	3.19	5.21E-11
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 4 h	3.18	1.99E-10
GSE45212	Col, WT, PstDC3000 AvrRpt2 0 h	Col, WT, PstDC3000 AvrRpt2 8 h	2.90	2.67E-10
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 12 h	1.78	2.37E-07
GSE45212	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 8 h	2.34	4.48E-09
GSE45214	Col, med14, PstDC3000 AvrRpt2 0 h	Col, med14, PstDC3000 AvrRpt2 4 h	2.08	1.51E-09
GSE45214	Col, med16, PstDC3000 AvrRpt2 0 h	Col, med16, PstDC3000 AvrRpt2 4 h	2.32	1.11E-10
GSE50526	Col, WT, mock 24 h	Col, WT, A. brassicicola 24 h	2.09	2.50E-02
GSE50526	Col, WT, mock 9 h	Col, WT, A. brassicicola 9 h	2.05	1.47E-02
GSE5520	Col, WT, control 24 h	Col, WT, PstDC3000 24 h	2.66	7.71E-06
GSE5520	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	3.30	3.93E-09
GSE56094	Col, WT, control 10 h	Col, WT, PstDC3000 10 h	4.61	1.05E-15
GSE56094	Col, WT, control 10 h	Col, WT, hrpA- 10 h	1.65	3.32E-03
GSE56094	Col, WT, control 11 h	Col, WT, PstDC3000 11 h	4.38	3.56E-14
GSE56094	Col, WT, control 11 h	Col, WT, hrpA- 11 h	2.30	3.18E-05
GSE56094	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	3.70	2.99E-11
GSE56094	Col, WT, control 13 h	Col, WT, PstDC3000 13 h	3.86	3.47E-12
GSE56094	Col, WT, control 5 h	Col, WT, PstDC3000 5 h	2.94	7.68E-07
GSE56094	Col, WT, control 6 h	Col, WT, PstDC3000 6 h	2.90	3.59E-07
GSE56094	Col, WT, control 7 h	Col, WT, PstDC3000 7 h	2.96	2.04E-07
GSE56094	Col, WT, control 7 h	Col, WT, hrpA- 7 h	1.52	9.27E-03
GSE56094	Col, WT, control 8 h	Col, WT, PstDC3000 8 h	3.59	1.36E-10
GSE56094	Col, WT, control 9 h	Col, WT, PstDC3000 9 h	3.04	3.08E-08
GSE6176	Col, WT, control 12 h	Col, WT, PstDC3000 12 h	2.69	9.90E-04