gene detail

Gene description

TAIR ID: AT4G26600

Short description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Pathogen responsiveness: -2.49

General responsiveness: -0.87

Orthologous

Rice:

OS02G0724600

Maize:

GRMZM2G005256

Wheat: No orthologous gene

GO biological process

maturation of LSU-rRNA, rRNA base methylation

GO cellular component

nucleus, nucleolus

GO molecular function

rRNA (cytosine-C5-)-methyltransferase activity

Protein domain

Pfam	PF17125, N-terminal domain of 16S rRNA methyltransferase RsmF
Pfam	PF01189, 16S rRNA methyltransferase RsmB/F

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

Not involved in KEGG pathway

Transcriptional regulation

Regulator:
AT1G24260

Target:
none

Protein-protein interaction network

No Interactor

Coexpression network

GSE45212_WT_PSTDC3000_AVRRPT2  view
GSE56094_WT_HRPA-  view
GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE56094_WT_PSTDC3000  view

Differentially expressed condition

1 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE58954	Col, WT, Psm AvrRpt2 0 h	Col, WT, Psm AvrRpt2 6 h	1.67	4.15E-03