gene detail

Gene description

TAIR ID: AT4G26090

Short description: NB-ARC domain-containing disease resistance protein

Pathogen responsiveness: -0.79

General responsiveness: -1.08

Orthologous

Rice: No orthologous gene

Maize:

GRMZM2G173647

Wheat: No orthologous gene

GO biological process

plant-type hypersensitive response, defense response to bacterium, defense response, detection of bacterium, signal transduction

GO cellular component

cytoplasm, plasma membrane

GO molecular function

ATP binding, ADP binding

Protein domain

Pfam	PF13855, Leucine rich repeat
Pfam	PF00931, NB-ARC domain
SMART	SM00382, AAA

Metabolic pathway

Not involved in metabolic pathway

KEGG pathway

PATH:ath04626: Plant-pathogen interaction

Transcriptional regulation

Regulator:
AT5G13790, AT1G24260, AT5G61850

Target:
none

Protein-protein interaction network

The number of partners (degree) is: 14 (Top20%)

click to view PPI network

Coexpression network

GSE13739_WT_GO  view
GSE13739_EDS16_GO  view
GSE45212_MED14_PSTDC3000_AVRRPT2  view

Differentially expressed condition

9 conditions

Series	Control	Treatment	Log₂FC	Adj. P value
GSE17464	Penta, control	Penta, Flg22 2 h	-1.60	3.39E-04
GSE2538	Col, WT, control	Col, WT, purified chitin octamer 30 min	1.52	8.03E-05
GSE37269	St0, WT, control	St0, WT, TEV 21 d	-1.65	9.62E-03
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_24 h	1.52	1.47E-04
GSE52979	Col, WT, acetone	Col, WT, acetone flg22_2 h	1.68	1.59E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_24 h	1.61	6.92E-05
GSE52979	Col, WT, oxo_C14_HSL	Col, WT, oxo_C14_HSL flg22_2 h	1.93	2.76E-06
GSE9674	Ws-4, AtMYB30 ox, control	Ws-4, AtMYB30 ox, Xanthomonas strain Xcc147 6 h	1.88	1.55E-03
GSE9674	Ws-4, WT, control	Ws-4, WT, Xanthomonas strain Xcc147 6 h	1.90	1.66E-03